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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
81.2
nTPM
Monaco:
46.0
nTPM
Schmiedel:
39.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
81.2
HPA sample
nTPM
gdT-cell nTPM: 64.8
Samples: 6
Max nTPM: 89.4
Min nTPM: 35.5
P10809_1007
35.5
P10809_1022
66.3
P10809_1041
89.4
P10809_1060
56.5
P10809_1077
72.3
P10809_1098
68.9
MAIT T-cell nTPM: 67.4
Samples: 6
Max nTPM: 87.5
Min nTPM: 28.1
P10809_1006
28.1
P10809_1024
65.4
P10809_1043
87.5
P10809_1062
71.5
P10809_1083
68.0
P10809_1097
83.8
Memory CD4 T-cell nTPM: 61.4
Samples: 6
Max nTPM: 73.9
Min nTPM: 31.6
P10809_1014
31.6
P10809_1026
56.5
P10809_1045
62.7
P10809_1064
73.1
P10809_1086
73.9
P10809_1113
70.6
Memory CD8 T-cell nTPM: 68.7
Samples: 5
Max nTPM: 84.3
Min nTPM: 35.9
P10809_1012
35.9
P10809_1027
64.3
P10809_1046
82.6
P10809_1065
76.3
P10809_1111
84.3
Naive CD4 T-cell nTPM: 48.5
Samples: 6
Max nTPM: 74.2
Min nTPM: 20.7
P10809_1015
20.7
P10809_1030
43.9
P10809_1049
74.2
P10809_1068
53.5
P10809_1085
52.0
P10809_1112
46.6
Naive CD8 T-cell nTPM: 59.5
Samples: 6
Max nTPM: 79.1
Min nTPM: 25.5
P10809_1016
25.5
P10809_1031
63.0
P10809_1050
75.6
P10809_1069
63.9
P10809_1087
79.1
P10809_1110
49.7
T-reg nTPM: 81.2
Samples: 6
Max nTPM: 149.5
Min nTPM: 45.4
P10809_1018
45.4
P10809_1037
65.7
P10809_1056
149.5
P10809_1075
74.1
P10809_1094
72.4
P10809_1106
80.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
46.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 31.4
Samples: 4
Max nTPM: 39.4
Min nTPM: 21.8
RHH5202_R3573
39.4
RHH5230_R3602
21.8
RHH5259_R3631
31.1
RHH5288_R3660
33.2
Effector memory CD8 T-cell nTPM: 39.5
Samples: 4
Max nTPM: 48.2
Min nTPM: 35.4
RHH5203_R3574
38.4
RHH5231_R3603
48.2
RHH5260_R3632
35.4
RHH5289_R3661
36.0
MAIT T-cell nTPM: 36.6
Samples: 4
Max nTPM: 45.7
Min nTPM: 31.5
RHH5233_R3605
32.1
RHH5205_R3576
37.1
RHH5262_R3634
45.7
RHH5297_R3663
31.5
Memory CD4 T-cell TFH nTPM: 31.0
Samples: 4
Max nTPM: 35.3
Min nTPM: 27.8
RHH5300_R3666
27.8
RHH5236_R3608
35.3
RHH5265_R3637
27.9
RHH5208_R3579
32.8
Memory CD4 T-cell Th1 nTPM: 27.0
Samples: 4
Max nTPM: 31.9
Min nTPM: 19.8
RHH5210_R3581
28.7
RHH5302_R3668
31.9
RHH5238_R3610
27.5
RHH5267_R3639
19.8
Memory CD4 T-cell Th1/Th17 nTPM: 33.0
Samples: 4
Max nTPM: 43.0
Min nTPM: 16.2
RHH5303_R3669
43.0
RHH5211_R3582
41.6
RHH5239_R3611
31.0
RHH5268_R3640
16.2
Memory CD4 T-cell Th17 nTPM: 35.6
Samples: 4
Max nTPM: 44.9
Min nTPM: 24.0
RHH5304_R3670
38.6
RHH5212_R3583
34.9
RHH5240_R3612
44.9
RHH5269_R3641
24.0
Memory CD4 T-cell Th2 nTPM: 35.1
Samples: 4
Max nTPM: 41.0
Min nTPM: 29.9
RHH5305_R3671
32.5
RHH5213_R3584
37.0
RHH5241_R3613
29.9
RHH5270_R3642
41.0
Naive CD4 T-cell nTPM: 25.1
Samples: 4
Max nTPM: 31.4
Min nTPM: 17.8
RHH5306_R3672
17.8
RHH5214_R3585
30.3
RHH5242_R3614
31.4
RHH5271_R3643
21.0
Naive CD8 T-cell nTPM: 29.9
Samples: 4
Max nTPM: 32.5
Min nTPM: 26.6
RHH5201_R3572
32.5
RHH5229_R3601
26.6
RHH5258_R3630
30.0
RHH5287_R3659
30.6
Non-Vd2 gdTCR nTPM: 41.2
Samples: 4
Max nTPM: 56.9
Min nTPM: 25.1
RHH5235_R3607
25.1
RHH5264_R3636
56.9
RHH5207_R3578
37.8
RHH5299_R3665
45.0
T-reg nTPM: 30.9
Samples: 4
Max nTPM: 50.2
Min nTPM: 19.7
RHH5301_R3667
30.9
RHH5237_R3609
50.2
RHH5266_R3638
19.7
RHH5209_R3580
22.8
Terminal effector memory CD4 T-cell nTPM: 39.0
Samples: 2
Max nTPM: 44.5
Min nTPM: 33.5
RHH5243_R3615
33.5
RHH5272_R3644
44.5
Terminal effector memory CD8 T-cell nTPM: 46.1
Samples: 4
Max nTPM: 56.2
Min nTPM: 37.8
RHH5232_R3604
44.8
RHH5204_R3575
56.2
RHH5261_R3633
45.4
RHH5296_R3662
37.8
Vd2 gdTCR nTPM: 41.1
Samples: 4
Max nTPM: 50.4
Min nTPM: 34.1
RHH5234_R3606
38.9
RHH5206_R3577
50.4
RHH5263_R3635
40.9
RHH5298_R3664
34.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
