HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:2.5 nTPM
HPA Brain:18.1 nTPM
GTEx:2.5 nTPM
FANTOM5:11.8 Scaled Tags Per Million
Pig:13.0 nTPM
Mouse:16.7 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA079100
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.1
Sample id Sample description nTPM
Hippocampus
nTPM: 16.0
2148 Female, age 91, left hemisphere 19.8
2621 Female, age 67, right hemisphere 16.8
1911 Female, age 85, right hemisphere 16.3
1898 Male, age 80, left hemisphere 15.7
2529 Female, age 94, left hemisphere 14.4
1855 Male, age 76, left hemisphere 13.3
Dentate gyrus
nTPM: 16.7
2528 Male, age 74, both hemispheres 18.3
1927 Female, age 91, both hemispheres 18.2
2531 Female, age 67, both hemispheres 17.8
2010 Male, age 76, both hemispheres 15.8
2530 Female, age 94, left hemisphere 15.4
2246 Female, age 85, both hemispheres 14.8
Entorhinal gyrus
nTPM: 18.1
2764 Male, age 80, right hemisphere 22.1
2613 Female, age 94, left hemisphere 20.7
2117 Female, age 91, right hemisphere 18.2
1787 Male, age 76, left hemisphere 17.6
2686 Male, age 75, right hemisphere 15.8
1938 Female, age 85, left hemisphere 14.0
Hippocampus, CA1
nTPM: 15.1
2045 Male, age 76, both hemispheres 16.6
2749 Male, age 80, left hemisphere 15.5
2527 Male, age 74, both hemispheres 15.3
1873 Female, age 85, both hemispheres 15.0
2082 Female, age 91, right hemisphere 13.3
Hippocampus, CA2
nTPM: 16.7
2249 Male, age 74, both hemispheres 19.9
1940 Female, age 85, left hemisphere 19.6
2437 Female, age 94, left hemisphere 15.9
1963 Male, age 80, left hemisphere 15.7
2113 Female, age 91, right hemisphere 15.1
1892 Male, age 76, both hemispheres 13.8
Hippocampus, CA3
nTPM: 15.4
2620 Female, age 94, left hemisphere 18.7
2436 Male, age 74, both hemispheres 16.2
1867 Male, age 76, both hemispheres 15.7
1891 Female, age 85, both hemispheres 15.6
2861 Female, age 67, both hemispheres 13.2
2137 Male, age 80, left hemisphere 13.1
Parahippocampal cortex
nTPM: 16.6
1990 Female, age 91, right hemisphere 20.6
2622 Female, age 67, right hemisphere 19.4
2532 Female, age 72, left hemisphere 18.1
2693 Female, age 94, both hemispheres 16.3
2250 Female, age 67, right hemisphere 16.2
2018 Male, age 76, both hemispheres 16.0
2692 Male, age 74, both hemispheres 15.5
1933 Female, age 85, both hemispheres 15.0
2245 Female, age 91, both hemispheres 14.7
1850 Male, age 80, both hemispheres 14.3
Perirhinal gyrus
nTPM: 15.4
1794 Male, age 80, right hemisphere 16.8
2521 Female, age 94, right hemisphere 16.1
1847 Female, age 91, left hemisphere 15.8
2848 Male, age 76, right hemisphere 15.6
1841 Female, age 85, right hemisphere 12.8
Subiculum
nTPM: 16.4
2729 Female, age 91, right hemisphere 19.6
1901 Male, age 80, both hemispheres 17.4
2619 Male, age 74, both hemispheres 17.2
2042 Male, age 76, both hemispheres 16.3
1977 Female, age 85, both hemispheres 16.1
2438 Female, age 94, left hemisphere 12.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 2.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.5
Samples: 197

Max nTPM: 5.6
Min nTPM: 0.1
Std nTPM: 0.9
Median nTPM: 2.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 5.6
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 4.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 4.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 4.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 4.3
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 4.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 4.1
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 4.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 4.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 4.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 4.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.8
FF:10153-102I9 76 years, female 14.2
FF:10169-103B7 60 years, female 9.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.0
Pig sample Sample description nTPM
Subiculum
nTPM: 11.0
Samples: 4

Max nTPM: 14.1
Min nTPM: 8.6
Sample A Female 14.1
Sample B Female 10.2
Sample C Male 11.0
Sample D Male 8.6
Dorsal hippocampus
nTPM: 12.4
Samples: 4

Max nTPM: 15.4
Min nTPM: 10.3
Sample A Female 15.4
Sample B Female 12.6
Sample C Male 11.3
Sample D Male 10.3
Entorhinal cortex
nTPM: 13.0
Samples: 4

Max nTPM: 14.1
Min nTPM: 12.0
Sample A Female 13.5
Sample B Female 12.3
Sample C Male 14.1
Sample D Male 12.0
Ventral hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 14.9
Min nTPM: 8.9
Sample A Female 11.6
Sample B Female 8.9
Sample C Male 14.9
Sample D Male 13.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 19.1
Min nTPM: 13.4
Sample A Male 17.1
Sample B Male 19.1
Sample C Female 16.9
Sample D Female 13.4
Hippocampal formation
nTPM: 16.7
Samples: 4

Max nTPM: 19.3
Min nTPM: 14.5
Sample A Male 19.3
Sample B Male 14.5
Sample C Female 17.6
Sample D Female 15.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
70200932 Antisense, RP_050517_03_A08, Mouse strain C57BL/6J (56 days, male) 0.5

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