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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
115.0
nTPM
Monaco:
98.4
nTPM
Schmiedel:
25.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
115.0
HPA sample
nTPM
gdT-cell nTPM: 91.9
Samples: 6
Max nTPM: 124.4
Min nTPM: 57.9
P10809_1007
57.9
P10809_1022
111.2
P10809_1041
124.4
P10809_1060
77.4
P10809_1077
87.9
P10809_1098
92.8
MAIT T-cell nTPM: 95.2
Samples: 6
Max nTPM: 121.3
Min nTPM: 70.9
P10809_1006
73.6
P10809_1024
121.3
P10809_1043
109.5
P10809_1062
89.6
P10809_1083
70.9
P10809_1097
106.2
Memory CD4 T-cell nTPM: 82.7
Samples: 6
Max nTPM: 96.4
Min nTPM: 57.4
P10809_1014
57.4
P10809_1026
94.8
P10809_1045
96.4
P10809_1064
86.1
P10809_1086
82.8
P10809_1113
78.4
Memory CD8 T-cell nTPM: 96.1
Samples: 5
Max nTPM: 107.9
Min nTPM: 66.0
P10809_1012
66.0
P10809_1027
104.1
P10809_1046
107.9
P10809_1065
98.2
P10809_1111
104.5
Naive CD4 T-cell nTPM: 68.6
Samples: 6
Max nTPM: 90.2
Min nTPM: 44.9
P10809_1015
44.9
P10809_1030
64.4
P10809_1049
90.2
P10809_1068
70.6
P10809_1085
75.1
P10809_1112
66.2
Naive CD8 T-cell nTPM: 79.5
Samples: 6
Max nTPM: 106.2
Min nTPM: 56.7
P10809_1016
56.7
P10809_1031
70.0
P10809_1050
84.2
P10809_1069
106.2
P10809_1087
86.4
P10809_1110
73.7
T-reg nTPM: 115.0
Samples: 6
Max nTPM: 188.4
Min nTPM: 88.3
P10809_1018
93.2
P10809_1037
97.7
P10809_1056
188.4
P10809_1075
102.7
P10809_1094
88.3
P10809_1106
119.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
98.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 70.7
Samples: 4
Max nTPM: 79.4
Min nTPM: 59.3
RHH5202_R3573
71.8
RHH5230_R3602
79.4
RHH5259_R3631
59.3
RHH5288_R3660
72.4
Effector memory CD8 T-cell nTPM: 96.2
Samples: 4
Max nTPM: 113.0
Min nTPM: 75.0
RHH5203_R3574
113.0
RHH5231_R3603
100.3
RHH5260_R3632
75.0
RHH5289_R3661
96.5
MAIT T-cell nTPM: 68.7
Samples: 4
Max nTPM: 91.9
Min nTPM: 46.2
RHH5233_R3605
72.4
RHH5205_R3576
91.9
RHH5262_R3634
64.2
RHH5297_R3663
46.2
Memory CD4 T-cell TFH nTPM: 70.7
Samples: 4
Max nTPM: 85.1
Min nTPM: 56.8
RHH5300_R3666
56.8
RHH5236_R3608
72.0
RHH5265_R3637
85.1
RHH5208_R3579
68.9
Memory CD4 T-cell Th1 nTPM: 76.4
Samples: 4
Max nTPM: 92.9
Min nTPM: 68.8
RHH5210_R3581
70.3
RHH5302_R3668
73.7
RHH5238_R3610
92.9
RHH5267_R3639
68.8
Memory CD4 T-cell Th1/Th17 nTPM: 79.5
Samples: 4
Max nTPM: 94.4
Min nTPM: 65.4
RHH5303_R3669
76.1
RHH5211_R3582
94.4
RHH5239_R3611
82.0
RHH5268_R3640
65.4
Memory CD4 T-cell Th17 nTPM: 73.5
Samples: 4
Max nTPM: 86.4
Min nTPM: 53.0
RHH5304_R3670
86.4
RHH5212_R3583
74.7
RHH5240_R3612
79.9
RHH5269_R3641
53.0
Memory CD4 T-cell Th2 nTPM: 63.6
Samples: 4
Max nTPM: 72.8
Min nTPM: 53.5
RHH5305_R3671
68.4
RHH5213_R3584
72.8
RHH5241_R3613
53.5
RHH5270_R3642
59.7
Naive CD4 T-cell nTPM: 66.6
Samples: 4
Max nTPM: 92.0
Min nTPM: 43.5
RHH5306_R3672
43.5
RHH5214_R3585
92.0
RHH5242_R3614
76.4
RHH5271_R3643
54.3
Naive CD8 T-cell nTPM: 98.4
Samples: 4
Max nTPM: 118.4
Min nTPM: 65.4
RHH5201_R3572
118.4
RHH5229_R3601
65.4
RHH5258_R3630
108.4
RHH5287_R3659
101.4
Non-Vd2 gdTCR nTPM: 76.4
Samples: 4
Max nTPM: 105.1
Min nTPM: 37.2
RHH5235_R3607
105.1
RHH5264_R3636
37.2
RHH5207_R3578
90.9
RHH5299_R3665
72.3
T-reg nTPM: 68.7
Samples: 4
Max nTPM: 99.7
Min nTPM: 44.4
RHH5301_R3667
68.8
RHH5237_R3609
99.7
RHH5266_R3638
44.4
RHH5209_R3580
61.8
Terminal effector memory CD4 T-cell nTPM: 84.0
Samples: 2
Max nTPM: 124.5
Min nTPM: 43.4
RHH5243_R3615
124.5
RHH5272_R3644
43.4
Terminal effector memory CD8 T-cell nTPM: 81.0
Samples: 4
Max nTPM: 109.6
Min nTPM: 55.1
RHH5232_R3604
79.3
RHH5204_R3575
109.6
RHH5261_R3633
55.1
RHH5296_R3662
79.8
Vd2 gdTCR nTPM: 74.6
Samples: 4
Max nTPM: 95.3
Min nTPM: 47.7
RHH5234_R3606
47.7
RHH5206_R3577
78.1
RHH5263_R3635
95.3
RHH5298_R3664
77.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
