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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
32.4
nTPM
Monaco:
203.6
nTPM
Schmiedel:
84.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
32.4
HPA sample
nTPM
gdT-cell nTPM: 31.5
Samples: 6
Max nTPM: 42.9
Min nTPM: 24.6
P10809_1007
28.2
P10809_1022
42.9
P10809_1041
24.6
P10809_1060
36.5
P10809_1077
32.0
P10809_1098
24.8
MAIT T-cell nTPM: 32.4
Samples: 6
Max nTPM: 38.5
Min nTPM: 24.5
P10809_1006
36.0
P10809_1024
29.7
P10809_1043
34.6
P10809_1062
38.5
P10809_1083
31.0
P10809_1097
24.5
Memory CD4 T-cell nTPM: 24.7
Samples: 6
Max nTPM: 31.9
Min nTPM: 18.3
P10809_1014
23.3
P10809_1026
31.9
P10809_1045
22.2
P10809_1064
25.6
P10809_1086
26.7
P10809_1113
18.3
Memory CD8 T-cell nTPM: 25.9
Samples: 5
Max nTPM: 36.0
Min nTPM: 15.7
P10809_1012
22.7
P10809_1027
28.4
P10809_1046
26.8
P10809_1065
36.0
P10809_1111
15.7
Naive CD4 T-cell nTPM: 26.4
Samples: 6
Max nTPM: 32.4
Min nTPM: 18.8
P10809_1015
18.8
P10809_1030
25.6
P10809_1049
27.9
P10809_1068
27.7
P10809_1085
32.4
P10809_1112
25.9
Naive CD8 T-cell nTPM: 22.9
Samples: 6
Max nTPM: 32.0
Min nTPM: 11.6
P10809_1016
26.2
P10809_1031
11.6
P10809_1050
20.0
P10809_1069
29.1
P10809_1087
32.0
P10809_1110
18.3
T-reg nTPM: 21.0
Samples: 6
Max nTPM: 32.7
Min nTPM: 8.6
P10809_1018
12.0
P10809_1037
8.6
P10809_1056
20.6
P10809_1075
32.7
P10809_1094
27.6
P10809_1106
24.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
203.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 163.7
Samples: 4
Max nTPM: 180.5
Min nTPM: 147.0
RHH5202_R3573
147.0
RHH5230_R3602
167.5
RHH5259_R3631
180.5
RHH5288_R3660
159.8
Effector memory CD8 T-cell nTPM: 169.1
Samples: 4
Max nTPM: 201.8
Min nTPM: 147.9
RHH5203_R3574
175.2
RHH5231_R3603
147.9
RHH5260_R3632
151.6
RHH5289_R3661
201.8
MAIT T-cell nTPM: 156.6
Samples: 4
Max nTPM: 180.9
Min nTPM: 119.0
RHH5233_R3605
178.2
RHH5205_R3576
180.9
RHH5262_R3634
119.0
RHH5297_R3663
148.2
Memory CD4 T-cell TFH nTPM: 159.7
Samples: 4
Max nTPM: 178.6
Min nTPM: 143.2
RHH5300_R3666
143.2
RHH5236_R3608
178.6
RHH5265_R3637
143.5
RHH5208_R3579
173.4
Memory CD4 T-cell Th1 nTPM: 156.4
Samples: 4
Max nTPM: 176.3
Min nTPM: 137.4
RHH5210_R3581
176.3
RHH5302_R3668
137.4
RHH5238_R3610
160.9
RHH5267_R3639
151.1
Memory CD4 T-cell Th1/Th17 nTPM: 175.3
Samples: 4
Max nTPM: 211.5
Min nTPM: 150.7
RHH5303_R3669
181.7
RHH5211_R3582
157.3
RHH5239_R3611
211.5
RHH5268_R3640
150.7
Memory CD4 T-cell Th17 nTPM: 131.7
Samples: 4
Max nTPM: 147.4
Min nTPM: 116.8
RHH5304_R3670
147.4
RHH5212_R3583
123.7
RHH5240_R3612
116.8
RHH5269_R3641
138.9
Memory CD4 T-cell Th2 nTPM: 146.7
Samples: 4
Max nTPM: 163.3
Min nTPM: 136.6
RHH5305_R3671
139.3
RHH5213_R3584
163.3
RHH5241_R3613
147.4
RHH5270_R3642
136.6
Naive CD4 T-cell nTPM: 160.7
Samples: 4
Max nTPM: 177.3
Min nTPM: 145.2
RHH5306_R3672
145.2
RHH5214_R3585
161.9
RHH5242_R3614
177.3
RHH5271_R3643
158.5
Naive CD8 T-cell nTPM: 144.8
Samples: 4
Max nTPM: 156.2
Min nTPM: 131.3
RHH5201_R3572
131.3
RHH5229_R3601
155.0
RHH5258_R3630
136.6
RHH5287_R3659
156.2
Non-Vd2 gdTCR nTPM: 190.0
Samples: 4
Max nTPM: 216.1
Min nTPM: 154.9
RHH5235_R3607
207.4
RHH5264_R3636
154.9
RHH5207_R3578
216.1
RHH5299_R3665
181.5
T-reg nTPM: 143.6
Samples: 4
Max nTPM: 162.3
Min nTPM: 126.4
RHH5301_R3667
135.0
RHH5237_R3609
162.3
RHH5266_R3638
126.4
RHH5209_R3580
150.6
Terminal effector memory CD4 T-cell nTPM: 203.7
Samples: 2
Max nTPM: 233.2
Min nTPM: 174.1
RHH5243_R3615
233.2
RHH5272_R3644
174.1
Terminal effector memory CD8 T-cell nTPM: 185.6
Samples: 4
Max nTPM: 209.3
Min nTPM: 172.5
RHH5232_R3604
184.5
RHH5204_R3575
176.2
RHH5261_R3633
172.5
RHH5296_R3662
209.3
Vd2 gdTCR nTPM: 157.6
Samples: 4
Max nTPM: 183.4
Min nTPM: 135.7
RHH5234_R3606
183.4
RHH5206_R3577
141.8
RHH5263_R3635
169.3
RHH5298_R3664
135.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
