We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
80.7
nTPM
Monaco:
280.4
nTPM
Schmiedel:
148.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
80.7
HPA sample
nTPM
gdT-cell nTPM: 47.0
Samples: 6
Max nTPM: 61.1
Min nTPM: 33.3
P10809_1007
61.1
P10809_1022
54.8
P10809_1041
39.3
P10809_1060
39.9
P10809_1077
33.3
P10809_1098
53.4
MAIT T-cell nTPM: 42.9
Samples: 6
Max nTPM: 61.9
Min nTPM: 26.2
P10809_1006
61.9
P10809_1024
47.5
P10809_1043
33.8
P10809_1062
40.3
P10809_1083
26.2
P10809_1097
47.9
Memory CD4 T-cell nTPM: 51.5
Samples: 6
Max nTPM: 79.2
Min nTPM: 37.4
P10809_1014
79.2
P10809_1026
44.5
P10809_1045
52.9
P10809_1064
37.4
P10809_1086
42.7
P10809_1113
52.1
Memory CD8 T-cell nTPM: 39.7
Samples: 5
Max nTPM: 73.2
Min nTPM: 27.3
P10809_1012
73.2
P10809_1027
29.3
P10809_1046
35.1
P10809_1065
27.3
P10809_1111
33.7
Naive CD4 T-cell nTPM: 80.6
Samples: 6
Max nTPM: 126.4
Min nTPM: 41.8
P10809_1015
126.4
P10809_1030
62.2
P10809_1049
41.8
P10809_1068
107.9
P10809_1085
63.1
P10809_1112
82.4
Naive CD8 T-cell nTPM: 58.6
Samples: 6
Max nTPM: 102.5
Min nTPM: 30.0
P10809_1016
102.5
P10809_1031
59.0
P10809_1050
54.0
P10809_1069
43.3
P10809_1087
30.0
P10809_1110
62.9
T-reg nTPM: 43.9
Samples: 6
Max nTPM: 63.6
Min nTPM: 17.1
P10809_1018
63.6
P10809_1037
50.9
P10809_1056
17.1
P10809_1075
37.8
P10809_1094
55.6
P10809_1106
38.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
280.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 227.8
Samples: 4
Max nTPM: 270.1
Min nTPM: 189.7
RHH5202_R3573
228.8
RHH5230_R3602
189.7
RHH5259_R3631
270.1
RHH5288_R3660
222.7
Effector memory CD8 T-cell nTPM: 167.6
Samples: 4
Max nTPM: 183.3
Min nTPM: 153.5
RHH5203_R3574
166.2
RHH5231_R3603
153.5
RHH5260_R3632
183.3
RHH5289_R3661
167.4
MAIT T-cell nTPM: 175.6
Samples: 4
Max nTPM: 190.0
Min nTPM: 164.7
RHH5233_R3605
177.2
RHH5205_R3576
190.0
RHH5262_R3634
170.6
RHH5297_R3663
164.7
Memory CD4 T-cell TFH nTPM: 202.0
Samples: 4
Max nTPM: 241.7
Min nTPM: 154.7
RHH5300_R3666
202.3
RHH5236_R3608
154.7
RHH5265_R3637
241.7
RHH5208_R3579
209.3
Memory CD4 T-cell Th1 nTPM: 236.2
Samples: 4
Max nTPM: 272.7
Min nTPM: 216.0
RHH5210_R3581
238.9
RHH5302_R3668
217.0
RHH5238_R3610
272.7
RHH5267_R3639
216.0
Memory CD4 T-cell Th1/Th17 nTPM: 232.0
Samples: 4
Max nTPM: 327.9
Min nTPM: 179.5
RHH5303_R3669
179.5
RHH5211_R3582
208.1
RHH5239_R3611
327.9
RHH5268_R3640
212.3
Memory CD4 T-cell Th17 nTPM: 225.1
Samples: 4
Max nTPM: 287.2
Min nTPM: 198.1
RHH5304_R3670
201.7
RHH5212_R3583
198.1
RHH5240_R3612
287.2
RHH5269_R3641
213.5
Memory CD4 T-cell Th2 nTPM: 242.9
Samples: 4
Max nTPM: 266.0
Min nTPM: 217.2
RHH5305_R3671
217.2
RHH5213_R3584
247.2
RHH5241_R3613
241.2
RHH5270_R3642
266.0
Naive CD4 T-cell nTPM: 280.4
Samples: 4
Max nTPM: 317.7
Min nTPM: 231.6
RHH5306_R3672
259.9
RHH5214_R3585
231.6
RHH5242_R3614
312.2
RHH5271_R3643
317.7
Naive CD8 T-cell nTPM: 235.7
Samples: 4
Max nTPM: 302.3
Min nTPM: 190.7
RHH5201_R3572
190.7
RHH5229_R3601
302.3
RHH5258_R3630
212.8
RHH5287_R3659
237.1
Non-Vd2 gdTCR nTPM: 164.7
Samples: 4
Max nTPM: 186.5
Min nTPM: 150.1
RHH5235_R3607
186.5
RHH5264_R3636
153.8
RHH5207_R3578
168.3
RHH5299_R3665
150.1
T-reg nTPM: 201.9
Samples: 4
Max nTPM: 234.0
Min nTPM: 173.4
RHH5301_R3667
183.5
RHH5237_R3609
173.4
RHH5266_R3638
216.7
RHH5209_R3580
234.0
Terminal effector memory CD4 T-cell nTPM: 225.1
Samples: 2
Max nTPM: 240.1
Min nTPM: 210.0
RHH5243_R3615
240.1
RHH5272_R3644
210.0
Terminal effector memory CD8 T-cell nTPM: 179.1
Samples: 4
Max nTPM: 207.7
Min nTPM: 131.8
RHH5232_R3604
207.7
RHH5204_R3575
173.6
RHH5261_R3633
203.4
RHH5296_R3662
131.8
Vd2 gdTCR nTPM: 184.9
Samples: 4
Max nTPM: 211.7
Min nTPM: 167.4
RHH5234_R3606
211.7
RHH5206_R3577
167.4
RHH5263_R3635
188.8
RHH5298_R3664
171.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
