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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
91.3
nTPM
Monaco:
246.7
nTPM
Schmiedel:
93.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
91.3
HPA sample
nTPM
gdT-cell nTPM: 61.2
Samples: 6
Max nTPM: 100.4
Min nTPM: 42.3
P10809_1007
49.6
P10809_1022
61.8
P10809_1041
100.4
P10809_1060
53.9
P10809_1077
42.3
P10809_1098
59.1
MAIT T-cell nTPM: 69.0
Samples: 6
Max nTPM: 83.3
Min nTPM: 60.2
P10809_1006
68.7
P10809_1024
83.3
P10809_1043
60.2
P10809_1062
65.7
P10809_1083
68.9
P10809_1097
67.2
Memory CD4 T-cell nTPM: 76.3
Samples: 6
Max nTPM: 92.9
Min nTPM: 60.6
P10809_1014
83.9
P10809_1026
92.9
P10809_1045
69.0
P10809_1064
60.6
P10809_1086
76.1
P10809_1113
75.5
Memory CD8 T-cell nTPM: 66.2
Samples: 5
Max nTPM: 81.4
Min nTPM: 58.2
P10809_1012
68.5
P10809_1027
58.2
P10809_1046
63.2
P10809_1065
59.9
P10809_1111
81.4
Naive CD4 T-cell nTPM: 91.4
Samples: 6
Max nTPM: 104.2
Min nTPM: 71.3
P10809_1015
97.7
P10809_1030
99.6
P10809_1049
104.2
P10809_1068
85.5
P10809_1085
71.3
P10809_1112
90.0
Naive CD8 T-cell nTPM: 78.0
Samples: 6
Max nTPM: 91.8
Min nTPM: 57.6
P10809_1016
91.8
P10809_1031
79.5
P10809_1050
81.1
P10809_1069
72.4
P10809_1087
57.6
P10809_1110
85.8
T-reg nTPM: 73.0
Samples: 6
Max nTPM: 89.9
Min nTPM: 62.3
P10809_1018
62.6
P10809_1037
68.2
P10809_1056
80.7
P10809_1075
62.3
P10809_1094
89.9
P10809_1106
74.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
246.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 203.6
Samples: 4
Max nTPM: 264.5
Min nTPM: 125.2
RHH5202_R3573
264.5
RHH5230_R3602
164.8
RHH5259_R3631
125.2
RHH5288_R3660
259.7
Effector memory CD8 T-cell nTPM: 165.3
Samples: 4
Max nTPM: 203.1
Min nTPM: 122.3
RHH5203_R3574
174.3
RHH5231_R3603
203.1
RHH5260_R3632
122.3
RHH5289_R3661
161.6
MAIT T-cell nTPM: 202.8
Samples: 4
Max nTPM: 258.7
Min nTPM: 160.9
RHH5233_R3605
210.1
RHH5205_R3576
160.9
RHH5262_R3634
181.4
RHH5297_R3663
258.7
Memory CD4 T-cell TFH nTPM: 217.9
Samples: 4
Max nTPM: 270.8
Min nTPM: 187.8
RHH5300_R3666
211.1
RHH5236_R3608
270.8
RHH5265_R3637
187.8
RHH5208_R3579
201.9
Memory CD4 T-cell Th1 nTPM: 184.1
Samples: 4
Max nTPM: 257.6
Min nTPM: 88.7
RHH5210_R3581
257.6
RHH5302_R3668
225.5
RHH5238_R3610
88.7
RHH5267_R3639
164.5
Memory CD4 T-cell Th1/Th17 nTPM: 212.2
Samples: 4
Max nTPM: 325.2
Min nTPM: 119.7
RHH5303_R3669
325.2
RHH5211_R3582
259.4
RHH5239_R3611
119.7
RHH5268_R3640
144.4
Memory CD4 T-cell Th17 nTPM: 173.0
Samples: 4
Max nTPM: 217.5
Min nTPM: 124.0
RHH5304_R3670
217.5
RHH5212_R3583
186.8
RHH5240_R3612
163.6
RHH5269_R3641
124.0
Memory CD4 T-cell Th2 nTPM: 224.3
Samples: 4
Max nTPM: 254.9
Min nTPM: 203.3
RHH5305_R3671
254.9
RHH5213_R3584
210.4
RHH5241_R3613
228.4
RHH5270_R3642
203.3
Naive CD4 T-cell nTPM: 243.6
Samples: 4
Max nTPM: 291.2
Min nTPM: 204.6
RHH5306_R3672
291.2
RHH5214_R3585
272.1
RHH5242_R3614
206.3
RHH5271_R3643
204.6
Naive CD8 T-cell nTPM: 246.7
Samples: 4
Max nTPM: 329.9
Min nTPM: 129.6
RHH5201_R3572
329.9
RHH5229_R3601
129.6
RHH5258_R3630
279.2
RHH5287_R3659
248.0
Non-Vd2 gdTCR nTPM: 149.6
Samples: 4
Max nTPM: 181.5
Min nTPM: 92.7
RHH5235_R3607
92.7
RHH5264_R3636
181.5
RHH5207_R3578
160.8
RHH5299_R3665
163.2
T-reg nTPM: 197.1
Samples: 4
Max nTPM: 244.8
Min nTPM: 157.1
RHH5301_R3667
220.8
RHH5237_R3609
244.8
RHH5266_R3638
165.8
RHH5209_R3580
157.1
Terminal effector memory CD4 T-cell nTPM: 162.5
Samples: 2
Max nTPM: 235.8
Min nTPM: 89.2
RHH5243_R3615
89.2
RHH5272_R3644
235.8
Terminal effector memory CD8 T-cell nTPM: 163.8
Samples: 4
Max nTPM: 216.4
Min nTPM: 111.5
RHH5232_R3604
141.4
RHH5204_R3575
185.8
RHH5261_R3633
111.5
RHH5296_R3662
216.4
Vd2 gdTCR nTPM: 184.6
Samples: 4
Max nTPM: 210.9
Min nTPM: 147.3
RHH5234_R3606
187.0
RHH5206_R3577
210.9
RHH5263_R3635
147.3
RHH5298_R3664
193.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
