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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
84.6
nTPM
Monaco:
111.4
nTPM
Schmiedel:
43.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
84.6
HPA sample
nTPM
gdT-cell nTPM: 50.6
Samples: 6
Max nTPM: 61.6
Min nTPM: 35.2
P10809_1007
35.2
P10809_1022
61.6
P10809_1041
55.8
P10809_1060
54.8
P10809_1077
50.4
P10809_1098
45.5
MAIT T-cell nTPM: 52.5
Samples: 6
Max nTPM: 60.4
Min nTPM: 37.0
P10809_1006
37.0
P10809_1024
60.4
P10809_1043
54.8
P10809_1062
53.2
P10809_1083
54.1
P10809_1097
55.7
Memory CD4 T-cell nTPM: 48.2
Samples: 6
Max nTPM: 56.8
Min nTPM: 37.8
P10809_1014
37.8
P10809_1026
42.3
P10809_1045
53.2
P10809_1064
50.9
P10809_1086
56.8
P10809_1113
48.0
Memory CD8 T-cell nTPM: 53.9
Samples: 5
Max nTPM: 59.1
Min nTPM: 37.9
P10809_1012
37.9
P10809_1027
57.0
P10809_1046
57.6
P10809_1065
59.1
P10809_1111
58.1
Naive CD4 T-cell nTPM: 51.6
Samples: 6
Max nTPM: 64.6
Min nTPM: 42.3
P10809_1015
42.3
P10809_1030
47.3
P10809_1049
64.6
P10809_1068
47.9
P10809_1085
57.9
P10809_1112
49.7
Naive CD8 T-cell nTPM: 55.1
Samples: 6
Max nTPM: 72.8
Min nTPM: 35.6
P10809_1016
35.6
P10809_1031
58.5
P10809_1050
51.5
P10809_1069
72.8
P10809_1087
61.8
P10809_1110
50.2
T-reg nTPM: 84.6
Samples: 6
Max nTPM: 120.8
Min nTPM: 62.9
P10809_1018
62.9
P10809_1037
120.8
P10809_1056
70.7
P10809_1075
65.3
P10809_1094
86.1
P10809_1106
101.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
111.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 74.3
Samples: 4
Max nTPM: 89.6
Min nTPM: 61.3
RHH5202_R3573
83.4
RHH5230_R3602
61.3
RHH5259_R3631
62.8
RHH5288_R3660
89.6
Effector memory CD8 T-cell nTPM: 111.4
Samples: 4
Max nTPM: 146.0
Min nTPM: 86.7
RHH5203_R3574
146.0
RHH5231_R3603
100.8
RHH5260_R3632
86.7
RHH5289_R3661
112.2
MAIT T-cell nTPM: 94.9
Samples: 4
Max nTPM: 131.2
Min nTPM: 76.6
RHH5233_R3605
76.6
RHH5205_R3576
86.1
RHH5262_R3634
131.2
RHH5297_R3663
85.6
Memory CD4 T-cell TFH nTPM: 80.1
Samples: 4
Max nTPM: 118.1
Min nTPM: 61.0
RHH5300_R3666
68.2
RHH5236_R3608
73.0
RHH5265_R3637
118.1
RHH5208_R3579
61.0
Memory CD4 T-cell Th1 nTPM: 67.1
Samples: 4
Max nTPM: 86.8
Min nTPM: 43.1
RHH5210_R3581
54.5
RHH5302_R3668
83.8
RHH5238_R3610
43.1
RHH5267_R3639
86.8
Memory CD4 T-cell Th1/Th17 nTPM: 81.0
Samples: 4
Max nTPM: 93.4
Min nTPM: 61.0
RHH5303_R3669
93.4
RHH5211_R3582
78.2
RHH5239_R3611
61.0
RHH5268_R3640
91.5
Memory CD4 T-cell Th17 nTPM: 71.7
Samples: 4
Max nTPM: 91.4
Min nTPM: 44.2
RHH5304_R3670
75.0
RHH5212_R3583
44.2
RHH5240_R3612
76.1
RHH5269_R3641
91.4
Memory CD4 T-cell Th2 nTPM: 90.2
Samples: 4
Max nTPM: 114.3
Min nTPM: 78.6
RHH5305_R3671
81.4
RHH5213_R3584
78.6
RHH5241_R3613
86.3
RHH5270_R3642
114.3
Naive CD4 T-cell nTPM: 77.2
Samples: 4
Max nTPM: 92.7
Min nTPM: 54.9
RHH5306_R3672
86.8
RHH5214_R3585
74.4
RHH5242_R3614
54.9
RHH5271_R3643
92.7
Naive CD8 T-cell nTPM: 72.1
Samples: 4
Max nTPM: 89.5
Min nTPM: 55.0
RHH5201_R3572
84.9
RHH5229_R3601
59.0
RHH5258_R3630
89.5
RHH5287_R3659
55.0
Non-Vd2 gdTCR nTPM: 93.4
Samples: 4
Max nTPM: 125.3
Min nTPM: 57.2
RHH5235_R3607
57.2
RHH5264_R3636
125.3
RHH5207_R3578
96.5
RHH5299_R3665
94.6
T-reg nTPM: 84.9
Samples: 4
Max nTPM: 94.3
Min nTPM: 76.3
RHH5301_R3667
94.3
RHH5237_R3609
83.2
RHH5266_R3638
85.8
RHH5209_R3580
76.3
Terminal effector memory CD4 T-cell nTPM: 90.5
Samples: 2
Max nTPM: 134.7
Min nTPM: 46.3
RHH5243_R3615
46.3
RHH5272_R3644
134.7
Terminal effector memory CD8 T-cell nTPM: 88.4
Samples: 4
Max nTPM: 101.4
Min nTPM: 80.9
RHH5232_R3604
83.8
RHH5204_R3575
80.9
RHH5261_R3633
87.3
RHH5296_R3662
101.4
Vd2 gdTCR nTPM: 85.3
Samples: 4
Max nTPM: 105.1
Min nTPM: 73.2
RHH5234_R3606
73.2
RHH5206_R3577
87.9
RHH5263_R3635
105.1
RHH5298_R3664
74.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
