HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:24.9 nTPM
HPA Brain:135.2 nTPM
GTEx:24.9 nTPM
FANTOM5:24.2 Scaled Tags Per Million
Pig:38.4 nTPM
Mouse:18.7 nTPM
Allen mouse:9.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015322
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 135.2
Sample id Sample description nTPM
Hippocampus
nTPM: 126.0
2529 Female, age 94, left hemisphere 135.7
1911 Female, age 85, right hemisphere 132.8
2148 Female, age 91, left hemisphere 132.5
1855 Male, age 76, left hemisphere 127.3
2621 Female, age 67, right hemisphere 125.5
1898 Male, age 80, left hemisphere 102.0
Dentate gyrus
nTPM: 128.9
2531 Female, age 67, both hemispheres 142.8
2010 Male, age 76, both hemispheres 133.8
2530 Female, age 94, left hemisphere 131.4
2246 Female, age 85, both hemispheres 128.9
2528 Male, age 74, both hemispheres 124.2
1927 Female, age 91, both hemispheres 112.3
Entorhinal gyrus
nTPM: 118.0
2117 Female, age 91, right hemisphere 142.6
2686 Male, age 75, right hemisphere 118.6
2764 Male, age 80, right hemisphere 117.6
1787 Male, age 76, left hemisphere 114.8
2613 Female, age 94, left hemisphere 107.4
1938 Female, age 85, left hemisphere 107.3
Hippocampus, CA1
nTPM: 121.3
2082 Female, age 91, right hemisphere 124.4
2045 Male, age 76, both hemispheres 123.1
2527 Male, age 74, both hemispheres 121.9
2749 Male, age 80, left hemisphere 121.3
1873 Female, age 85, both hemispheres 115.9
Hippocampus, CA2
nTPM: 119.2
2113 Female, age 91, right hemisphere 127.0
1963 Male, age 80, left hemisphere 126.5
2437 Female, age 94, left hemisphere 120.9
2249 Male, age 74, both hemispheres 118.4
1940 Female, age 85, left hemisphere 114.3
1892 Male, age 76, both hemispheres 108.0
Hippocampus, CA3
nTPM: 123.6
2861 Female, age 67, both hemispheres 133.6
1891 Female, age 85, both hemispheres 132.3
2137 Male, age 80, left hemisphere 125.7
2620 Female, age 94, left hemisphere 121.0
1867 Male, age 76, both hemispheres 119.3
2436 Male, age 74, both hemispheres 109.7
Parahippocampal cortex
nTPM: 118.9
2532 Female, age 72, left hemisphere 140.3
2018 Male, age 76, both hemispheres 136.4
2622 Female, age 67, right hemisphere 132.3
2692 Male, age 74, both hemispheres 128.3
2245 Female, age 91, both hemispheres 117.6
2250 Female, age 67, right hemisphere 110.5
1933 Female, age 85, both hemispheres 109.3
1990 Female, age 91, right hemisphere 107.5
2693 Female, age 94, both hemispheres 103.9
1850 Male, age 80, both hemispheres 103.3
Perirhinal gyrus
nTPM: 103.0
2848 Male, age 76, right hemisphere 109.2
2521 Female, age 94, right hemisphere 105.0
1841 Female, age 85, right hemisphere 104.1
1794 Male, age 80, right hemisphere 102.3
1847 Female, age 91, left hemisphere 94.6
Subiculum
nTPM: 135.2
2042 Male, age 76, both hemispheres 155.0
2438 Female, age 94, left hemisphere 148.0
1901 Male, age 80, both hemispheres 135.6
2729 Female, age 91, right hemisphere 128.0
1977 Female, age 85, both hemispheres 122.9
2619 Male, age 74, both hemispheres 121.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.9
Samples: 197

Max nTPM: 53.6
Min nTPM: 6.9
Std nTPM: 7.1
Median nTPM: 23.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 53.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 46.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 46.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 42.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 41.3
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 41.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 39.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 39.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 38.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 38.4
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 37.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.2
FF:10153-102I9 76 years, female 29.8
FF:10169-103B7 60 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.4
Pig sample Sample description nTPM
Subiculum
nTPM: 30.9
Samples: 4

Max nTPM: 34.5
Min nTPM: 26.1
Sample A Female 34.3
Sample B Female 34.5
Sample C Male 28.8
Sample D Male 26.1
Dorsal hippocampus
nTPM: 38.4
Samples: 4

Max nTPM: 43.7
Min nTPM: 34.1
Sample A Female 38.5
Sample B Female 43.7
Sample C Male 34.1
Sample D Male 37.4
Entorhinal cortex
nTPM: 29.5
Samples: 4

Max nTPM: 33.3
Min nTPM: 27.6
Sample A Female 28.9
Sample B Female 33.3
Sample C Male 27.6
Sample D Male 28.2
Ventral hippocampus
nTPM: 35.1
Samples: 4

Max nTPM: 37.4
Min nTPM: 32.6
Sample A Female 32.6
Sample B Female 37.4
Sample C Male 36.3
Sample D Male 33.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.7
Samples: 4

Max nTPM: 20.5
Min nTPM: 17.9
Sample A Male 18.3
Sample B Male 20.5
Sample C Female 17.9
Sample D Female 17.9
Hippocampal formation
nTPM: 18.3
Samples: 4

Max nTPM: 20.0
Min nTPM: 15.9
Sample A Male 18.0
Sample B Male 20.0
Sample C Female 19.4
Sample D Female 15.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.3
69262264 Antisense, RP_050303_01_D07, Mouse strain C57BL/6J (56 days, male) 9.3

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