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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
27.9
nTPM
Monaco:
194.3
nTPM
Schmiedel:
145.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.9
HPA sample
nTPM
gdT-cell nTPM: 13.1
Samples: 6
Max nTPM: 18.1
Min nTPM: 10.0
P10809_1007
12.0
P10809_1022
18.1
P10809_1041
12.5
P10809_1060
11.2
P10809_1077
14.7
P10809_1098
10.0
MAIT T-cell nTPM: 27.6
Samples: 6
Max nTPM: 34.8
Min nTPM: 21.1
P10809_1006
34.8
P10809_1024
26.4
P10809_1043
21.1
P10809_1062
31.3
P10809_1083
27.9
P10809_1097
24.3
Memory CD4 T-cell nTPM: 16.3
Samples: 6
Max nTPM: 17.6
Min nTPM: 15.3
P10809_1014
16.8
P10809_1026
15.3
P10809_1045
17.6
P10809_1064
17.2
P10809_1086
15.3
P10809_1113
15.8
Memory CD8 T-cell nTPM: 12.5
Samples: 5
Max nTPM: 20.6
Min nTPM: 6.4
P10809_1012
20.6
P10809_1027
11.7
P10809_1046
9.4
P10809_1065
14.4
P10809_1111
6.4
Naive CD4 T-cell nTPM: 27.9
Samples: 6
Max nTPM: 32.7
Min nTPM: 22.4
P10809_1015
32.7
P10809_1030
22.4
P10809_1049
26.6
P10809_1068
32.6
P10809_1085
27.4
P10809_1112
25.9
Naive CD8 T-cell nTPM: 16.9
Samples: 6
Max nTPM: 26.4
Min nTPM: 11.4
P10809_1016
26.4
P10809_1031
15.5
P10809_1050
15.6
P10809_1069
16.2
P10809_1087
11.4
P10809_1110
16.0
T-reg nTPM: 22.6
Samples: 6
Max nTPM: 33.1
Min nTPM: 7.7
P10809_1018
33.1
P10809_1037
25.6
P10809_1056
7.7
P10809_1075
29.4
P10809_1094
17.2
P10809_1106
22.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
194.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 159.1
Samples: 4
Max nTPM: 185.2
Min nTPM: 131.5
RHH5202_R3573
180.5
RHH5230_R3602
131.5
RHH5259_R3631
185.2
RHH5288_R3660
139.0
Effector memory CD8 T-cell nTPM: 90.4
Samples: 4
Max nTPM: 123.3
Min nTPM: 53.3
RHH5203_R3574
111.4
RHH5231_R3603
53.3
RHH5260_R3632
73.5
RHH5289_R3661
123.3
MAIT T-cell nTPM: 171.0
Samples: 4
Max nTPM: 237.2
Min nTPM: 126.3
RHH5233_R3605
178.0
RHH5205_R3576
237.2
RHH5262_R3634
142.4
RHH5297_R3663
126.3
Memory CD4 T-cell TFH nTPM: 194.3
Samples: 4
Max nTPM: 235.1
Min nTPM: 143.2
RHH5300_R3666
177.9
RHH5236_R3608
143.2
RHH5265_R3637
221.1
RHH5208_R3579
235.1
Memory CD4 T-cell Th1 nTPM: 147.7
Samples: 4
Max nTPM: 179.5
Min nTPM: 127.1
RHH5210_R3581
179.5
RHH5302_R3668
127.1
RHH5238_R3610
142.4
RHH5267_R3639
141.7
Memory CD4 T-cell Th1/Th17 nTPM: 118.7
Samples: 4
Max nTPM: 147.5
Min nTPM: 97.9
RHH5303_R3669
97.9
RHH5211_R3582
114.9
RHH5239_R3611
147.5
RHH5268_R3640
114.5
Memory CD4 T-cell Th17 nTPM: 129.4
Samples: 4
Max nTPM: 151.4
Min nTPM: 99.7
RHH5304_R3670
141.6
RHH5212_R3583
99.7
RHH5240_R3612
124.7
RHH5269_R3641
151.4
Memory CD4 T-cell Th2 nTPM: 134.6
Samples: 4
Max nTPM: 153.4
Min nTPM: 109.6
RHH5305_R3671
141.2
RHH5213_R3584
109.6
RHH5241_R3613
134.3
RHH5270_R3642
153.4
Naive CD4 T-cell nTPM: 190.5
Samples: 4
Max nTPM: 208.4
Min nTPM: 169.1
RHH5306_R3672
169.1
RHH5214_R3585
208.4
RHH5242_R3614
189.3
RHH5271_R3643
195.0
Naive CD8 T-cell nTPM: 182.3
Samples: 4
Max nTPM: 243.0
Min nTPM: 150.1
RHH5201_R3572
243.0
RHH5229_R3601
153.9
RHH5258_R3630
150.1
RHH5287_R3659
182.1
Non-Vd2 gdTCR nTPM: 91.6
Samples: 4
Max nTPM: 111.6
Min nTPM: 76.1
RHH5235_R3607
92.3
RHH5264_R3636
76.1
RHH5207_R3578
111.6
RHH5299_R3665
86.2
T-reg nTPM: 160.6
Samples: 4
Max nTPM: 180.4
Min nTPM: 150.2
RHH5301_R3667
159.3
RHH5237_R3609
150.2
RHH5266_R3638
152.5
RHH5209_R3580
180.4
Terminal effector memory CD4 T-cell nTPM: 86.9
Samples: 2
Max nTPM: 90.5
Min nTPM: 83.2
RHH5243_R3615
83.2
RHH5272_R3644
90.5
Terminal effector memory CD8 T-cell nTPM: 83.0
Samples: 4
Max nTPM: 95.7
Min nTPM: 72.7
RHH5232_R3604
72.7
RHH5204_R3575
89.0
RHH5261_R3633
95.7
RHH5296_R3662
74.7
Vd2 gdTCR nTPM: 105.2
Samples: 4
Max nTPM: 116.2
Min nTPM: 86.6
RHH5234_R3606
113.4
RHH5206_R3577
104.4
RHH5263_R3635
116.2
RHH5298_R3664
86.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
