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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:761.3 nTPM
FANTOM5:676.5 Scaled Tags Per Million
Pig:286.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB018614Antibody CAB069394Antibody CAB080034
Glial cells MediumNot detectedHigh
Neuronal cells LowLowLow





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 761.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 761.3
Samples: 246

Max nTPM: 1675.0
Min nTPM: 320.3
Std nTPM: 195.8
Median nTPM: 723.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1675.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1617.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1288.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1236.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1224.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1211.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1162.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1160.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1155.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1128.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1124.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1122.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1118.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1117.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1109.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1097.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1095.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1090.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1086.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1078.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1057.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1038.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 1031.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1020.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1016.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1016.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 993.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 983.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 980.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 977.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 974.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 971.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 970.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 964.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 962.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 942.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 941.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 940.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 937.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 936.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 935.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 933.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 933.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 926.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 924.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 920.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 918.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 917.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 916.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 915.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 906.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 904.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 904.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 900.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 899.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 895.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 889.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 883.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 881.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 872.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 870.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 869.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 866.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 860.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 851.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 851.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 850.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 841.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 836.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 836.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 835.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 823.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 823.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 822.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 821.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 818.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 816.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 814.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 814.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 812.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 812.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 801.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 800.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 799.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 799.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 797.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 796.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 795.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 793.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 793.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 791.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 789.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 789.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 784.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 783.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 781.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 780.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 777.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 776.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 776.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 774.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 768.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 765.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 763.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 756.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 754.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 753.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 752.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 751.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 751.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 748.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 748.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 747.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 742.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 740.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 738.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 737.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 732.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 729.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 729.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 728.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 726.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 723.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 722.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 721.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 720.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 718.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 717.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 715.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 714.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 712.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 707.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 707.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 706.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 706.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 706.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 705.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 705.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 705.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 700.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 699.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 698.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 698.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 698.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 697.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 696.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 695.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 694.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 694.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 694.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 693.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 692.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 691.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 691.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 688.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 685.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 685.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 681.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 680.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 680.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 680.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 679.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 679.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 674.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 674.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 673.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 670.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 668.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 667.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 666.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 666.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 665.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 656.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 654.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 648.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 648.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 647.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 647.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 645.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 643.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 642.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 642.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 638.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 635.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 633.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 632.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 632.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 628.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 628.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 627.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 625.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 624.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 622.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 617.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 615.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 615.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 614.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 609.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 607.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 607.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 606.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 606.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 604.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 603.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 603.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 599.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 598.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 597.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 597.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 594.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 592.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 587.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 582.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 582.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 574.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 571.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 569.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 569.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 560.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 560.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 559.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 558.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 535.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 533.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 533.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 532.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 531.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 527.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 520.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 515.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 510.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 505.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 504.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 502.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 497.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 496.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 466.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 441.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 426.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 424.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 419.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 406.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 386.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 376.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 322.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 320.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max Scaled Tags Per Million 676.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 676.5
FF:10164-103B2 76 years, female 676.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 286.2
Pig sample Sample description nTPM
Caudate
nTPM: 286.2
Samples: 4

Max nTPM: 363.4
Min nTPM: 232.0
Sample A Female 232.0
Sample B Female 296.8
Sample C Male 363.4
Sample D Male 252.4

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