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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
152.0
nTPM
Monaco:
97.6
nTPM
Schmiedel:
86.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
152.0
HPA sample
nTPM
gdT-cell nTPM: 149.1
Samples: 6
Max nTPM: 167.2
Min nTPM: 117.6
P10809_1007
149.3
P10809_1022
167.2
P10809_1041
155.7
P10809_1060
117.6
P10809_1077
156.2
P10809_1098
148.3
MAIT T-cell nTPM: 152.0
Samples: 6
Max nTPM: 192.5
Min nTPM: 129.5
P10809_1006
129.5
P10809_1024
133.7
P10809_1043
192.5
P10809_1062
144.5
P10809_1083
139.5
P10809_1097
172.0
Memory CD4 T-cell nTPM: 119.1
Samples: 6
Max nTPM: 136.9
Min nTPM: 103.4
P10809_1014
104.3
P10809_1026
117.9
P10809_1045
124.8
P10809_1064
103.4
P10809_1086
127.2
P10809_1113
136.9
Memory CD8 T-cell nTPM: 121.2
Samples: 5
Max nTPM: 160.7
Min nTPM: 102.8
P10809_1012
102.8
P10809_1027
124.5
P10809_1046
160.7
P10809_1065
104.3
P10809_1111
113.5
Naive CD4 T-cell nTPM: 100.1
Samples: 6
Max nTPM: 118.7
Min nTPM: 75.9
P10809_1015
75.9
P10809_1030
118.7
P10809_1049
92.8
P10809_1068
98.9
P10809_1085
111.2
P10809_1112
102.9
Naive CD8 T-cell nTPM: 107.3
Samples: 6
Max nTPM: 128.8
Min nTPM: 80.6
P10809_1016
80.6
P10809_1031
100.8
P10809_1050
119.4
P10809_1069
112.3
P10809_1087
128.8
P10809_1110
101.9
T-reg nTPM: 96.6
Samples: 6
Max nTPM: 125.1
Min nTPM: 72.5
P10809_1018
91.2
P10809_1037
109.3
P10809_1056
87.7
P10809_1075
72.5
P10809_1094
125.1
P10809_1106
93.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
97.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 61.4
Samples: 4
Max nTPM: 100.3
Min nTPM: 36.0
RHH5202_R3573
56.6
RHH5230_R3602
36.0
RHH5259_R3631
52.7
RHH5288_R3660
100.3
Effector memory CD8 T-cell nTPM: 60.4
Samples: 4
Max nTPM: 83.2
Min nTPM: 50.6
RHH5203_R3574
52.3
RHH5231_R3603
83.2
RHH5260_R3632
55.3
RHH5289_R3661
50.6
MAIT T-cell nTPM: 77.4
Samples: 4
Max nTPM: 108.1
Min nTPM: 42.7
RHH5233_R3605
76.2
RHH5205_R3576
42.7
RHH5262_R3634
82.5
RHH5297_R3663
108.1
Memory CD4 T-cell TFH nTPM: 70.1
Samples: 4
Max nTPM: 115.4
Min nTPM: 49.5
RHH5300_R3666
59.2
RHH5236_R3608
115.4
RHH5265_R3637
49.5
RHH5208_R3579
56.2
Memory CD4 T-cell Th1 nTPM: 66.1
Samples: 4
Max nTPM: 100.8
Min nTPM: 45.9
RHH5210_R3581
68.4
RHH5302_R3668
100.8
RHH5238_R3610
45.9
RHH5267_R3639
49.1
Memory CD4 T-cell Th1/Th17 nTPM: 67.1
Samples: 4
Max nTPM: 116.9
Min nTPM: 21.9
RHH5303_R3669
116.9
RHH5211_R3582
70.4
RHH5239_R3611
21.9
RHH5268_R3640
59.0
Memory CD4 T-cell Th17 nTPM: 54.2
Samples: 4
Max nTPM: 78.2
Min nTPM: 41.3
RHH5304_R3670
53.7
RHH5212_R3583
78.2
RHH5240_R3612
41.3
RHH5269_R3641
43.5
Memory CD4 T-cell Th2 nTPM: 72.2
Samples: 4
Max nTPM: 101.3
Min nTPM: 56.6
RHH5305_R3671
72.0
RHH5213_R3584
58.9
RHH5241_R3613
101.3
RHH5270_R3642
56.6
Naive CD4 T-cell nTPM: 58.7
Samples: 4
Max nTPM: 72.3
Min nTPM: 37.1
RHH5306_R3672
69.5
RHH5214_R3585
72.3
RHH5242_R3614
55.9
RHH5271_R3643
37.1
Naive CD8 T-cell nTPM: 44.9
Samples: 4
Max nTPM: 69.6
Min nTPM: 23.1
RHH5201_R3572
47.1
RHH5229_R3601
23.1
RHH5258_R3630
69.6
RHH5287_R3659
39.6
Non-Vd2 gdTCR nTPM: 81.7
Samples: 4
Max nTPM: 126.0
Min nTPM: 37.9
RHH5235_R3607
37.9
RHH5264_R3636
99.8
RHH5207_R3578
63.2
RHH5299_R3665
126.0
T-reg nTPM: 59.8
Samples: 4
Max nTPM: 83.0
Min nTPM: 37.0
RHH5301_R3667
67.0
RHH5237_R3609
83.0
RHH5266_R3638
37.0
RHH5209_R3580
52.2
Terminal effector memory CD4 T-cell nTPM: 63.1
Samples: 2
Max nTPM: 84.6
Min nTPM: 41.6
RHH5243_R3615
41.6
RHH5272_R3644
84.6
Terminal effector memory CD8 T-cell nTPM: 87.3
Samples: 4
Max nTPM: 114.9
Min nTPM: 58.0
RHH5232_R3604
75.1
RHH5204_R3575
114.9
RHH5261_R3633
58.0
RHH5296_R3662
101.0
Vd2 gdTCR nTPM: 97.6
Samples: 4
Max nTPM: 134.7
Min nTPM: 64.1
RHH5234_R3606
72.0
RHH5206_R3577
119.5
RHH5263_R3635
64.1
RHH5298_R3664
134.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
