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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
49.8
nTPM
Monaco:
225.5
nTPM
Schmiedel:
390.3
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
49.8
HPA sample
nTPM
gdT-cell nTPM: 28.2
Samples: 6
Max nTPM: 58.0
Min nTPM: 13.2
P10809_1007
18.0
P10809_1022
13.2
P10809_1041
58.0
P10809_1060
26.0
P10809_1077
22.6
P10809_1098
31.1
MAIT T-cell nTPM: 43.6
Samples: 6
Max nTPM: 64.3
Min nTPM: 22.7
P10809_1006
33.0
P10809_1024
43.1
P10809_1043
44.6
P10809_1062
54.1
P10809_1083
22.7
P10809_1097
64.3
Memory CD4 T-cell nTPM: 20.0
Samples: 6
Max nTPM: 30.0
Min nTPM: 10.7
P10809_1014
21.1
P10809_1026
14.8
P10809_1045
29.0
P10809_1064
10.7
P10809_1086
14.1
P10809_1113
30.0
Memory CD8 T-cell nTPM: 17.4
Samples: 5
Max nTPM: 26.4
Min nTPM: 8.1
P10809_1012
16.7
P10809_1027
12.3
P10809_1046
23.7
P10809_1065
8.1
P10809_1111
26.4
Naive CD4 T-cell nTPM: 49.8
Samples: 6
Max nTPM: 61.6
Min nTPM: 37.9
P10809_1015
37.9
P10809_1030
38.2
P10809_1049
61.6
P10809_1068
57.8
P10809_1085
48.1
P10809_1112
55.1
Naive CD8 T-cell nTPM: 33.7
Samples: 6
Max nTPM: 48.9
Min nTPM: 5.1
P10809_1016
34.0
P10809_1031
37.1
P10809_1050
42.0
P10809_1069
35.3
P10809_1087
5.1
P10809_1110
48.9
T-reg nTPM: 15.1
Samples: 6
Max nTPM: 20.2
Min nTPM: 7.8
P10809_1018
14.4
P10809_1037
7.8
P10809_1056
13.8
P10809_1075
16.5
P10809_1094
20.2
P10809_1106
17.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
225.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 91.3
Samples: 4
Max nTPM: 126.2
Min nTPM: 50.5
RHH5202_R3573
126.2
RHH5230_R3602
50.5
RHH5259_R3631
83.5
RHH5288_R3660
104.8
Effector memory CD8 T-cell nTPM: 20.8
Samples: 4
Max nTPM: 36.3
Min nTPM: 3.0
RHH5203_R3574
29.3
RHH5231_R3603
3.0
RHH5260_R3632
14.6
RHH5289_R3661
36.3
MAIT T-cell nTPM: 102.6
Samples: 4
Max nTPM: 147.1
Min nTPM: 65.1
RHH5233_R3605
65.1
RHH5205_R3576
147.1
RHH5262_R3634
72.0
RHH5297_R3663
126.3
Memory CD4 T-cell TFH nTPM: 123.5
Samples: 4
Max nTPM: 172.3
Min nTPM: 82.9
RHH5300_R3666
110.6
RHH5236_R3608
128.0
RHH5265_R3637
82.9
RHH5208_R3579
172.3
Memory CD4 T-cell Th1 nTPM: 83.3
Samples: 4
Max nTPM: 117.9
Min nTPM: 52.0
RHH5210_R3581
117.9
RHH5302_R3668
78.3
RHH5238_R3610
52.0
RHH5267_R3639
85.0
Memory CD4 T-cell Th1/Th17 nTPM: 60.9
Samples: 4
Max nTPM: 73.2
Min nTPM: 37.4
RHH5303_R3669
71.8
RHH5211_R3582
73.2
RHH5239_R3611
37.4
RHH5268_R3640
61.3
Memory CD4 T-cell Th17 nTPM: 68.5
Samples: 4
Max nTPM: 90.3
Min nTPM: 48.7
RHH5304_R3670
90.3
RHH5212_R3583
76.3
RHH5240_R3612
48.7
RHH5269_R3641
58.7
Memory CD4 T-cell Th2 nTPM: 59.7
Samples: 4
Max nTPM: 79.9
Min nTPM: 46.8
RHH5305_R3671
79.9
RHH5213_R3584
51.7
RHH5241_R3613
46.8
RHH5270_R3642
60.2
Naive CD4 T-cell nTPM: 150.2
Samples: 4
Max nTPM: 167.7
Min nTPM: 140.9
RHH5306_R3672
140.9
RHH5214_R3585
167.7
RHH5242_R3614
147.9
RHH5271_R3643
144.1
Naive CD8 T-cell nTPM: 225.5
Samples: 4
Max nTPM: 268.7
Min nTPM: 174.1
RHH5201_R3572
268.7
RHH5229_R3601
174.1
RHH5258_R3630
200.7
RHH5287_R3659
258.4
Non-Vd2 gdTCR nTPM: 110.1
Samples: 4
Max nTPM: 212.6
Min nTPM: 22.2
RHH5235_R3607
22.2
RHH5264_R3636
52.3
RHH5207_R3578
212.6
RHH5299_R3665
153.3
T-reg nTPM: 125.2
Samples: 4
Max nTPM: 161.7
Min nTPM: 98.2
RHH5301_R3667
98.2
RHH5237_R3609
100.9
RHH5266_R3638
140.1
RHH5209_R3580
161.7
Terminal effector memory CD4 T-cell nTPM: 21.8
Samples: 2
Max nTPM: 39.8
Min nTPM: 3.7
RHH5243_R3615
3.7
RHH5272_R3644
39.8
Terminal effector memory CD8 T-cell nTPM: 48.9
Samples: 4
Max nTPM: 86.1
Min nTPM: 3.1
RHH5232_R3604
3.1
RHH5204_R3575
63.7
RHH5261_R3633
86.1
RHH5296_R3662
42.6
Vd2 gdTCR nTPM: 69.7
Samples: 4
Max nTPM: 95.0
Min nTPM: 29.4
RHH5234_R3606
29.4
RHH5206_R3577
95.0
RHH5263_R3635
70.9
RHH5298_R3664
83.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
