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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
211.0
nTPM
Monaco:
118.1
nTPM
Schmiedel:
51.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
211.0
HPA sample
nTPM
gdT-cell nTPM: 170.3
Samples: 6
Max nTPM: 191.4
Min nTPM: 118.3
P10809_1007
118.3
P10809_1022
181.4
P10809_1041
191.4
P10809_1060
165.7
P10809_1077
186.7
P10809_1098
178.2
MAIT T-cell nTPM: 202.9
Samples: 6
Max nTPM: 303.3
Min nTPM: 125.0
P10809_1006
125.0
P10809_1024
303.3
P10809_1043
194.5
P10809_1062
191.3
P10809_1083
167.8
P10809_1097
235.2
Memory CD4 T-cell nTPM: 186.5
Samples: 6
Max nTPM: 230.8
Min nTPM: 129.9
P10809_1014
129.9
P10809_1026
176.6
P10809_1045
230.8
P10809_1064
172.0
P10809_1086
225.4
P10809_1113
184.1
Memory CD8 T-cell nTPM: 195.0
Samples: 5
Max nTPM: 231.6
Min nTPM: 133.0
P10809_1012
133.0
P10809_1027
231.6
P10809_1046
213.8
P10809_1065
202.4
P10809_1111
194.2
Naive CD4 T-cell nTPM: 138.1
Samples: 6
Max nTPM: 189.7
Min nTPM: 93.2
P10809_1015
93.2
P10809_1030
172.4
P10809_1049
189.7
P10809_1068
115.2
P10809_1085
120.0
P10809_1112
138.2
Naive CD8 T-cell nTPM: 159.1
Samples: 6
Max nTPM: 197.5
Min nTPM: 120.8
P10809_1016
120.8
P10809_1031
160.5
P10809_1050
180.5
P10809_1069
161.0
P10809_1087
197.5
P10809_1110
134.1
T-reg nTPM: 211.0
Samples: 6
Max nTPM: 256.0
Min nTPM: 146.1
P10809_1018
146.1
P10809_1037
256.0
P10809_1056
228.3
P10809_1075
186.0
P10809_1094
208.6
P10809_1106
241.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
118.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 97.3
Samples: 4
Max nTPM: 127.2
Min nTPM: 78.7
RHH5202_R3573
98.6
RHH5230_R3602
84.8
RHH5259_R3631
78.7
RHH5288_R3660
127.2
Effector memory CD8 T-cell nTPM: 82.0
Samples: 4
Max nTPM: 95.7
Min nTPM: 66.8
RHH5203_R3574
95.7
RHH5231_R3603
87.8
RHH5260_R3632
77.5
RHH5289_R3661
66.8
MAIT T-cell nTPM: 99.8
Samples: 4
Max nTPM: 133.7
Min nTPM: 75.9
RHH5233_R3605
100.5
RHH5205_R3576
88.9
RHH5262_R3634
75.9
RHH5297_R3663
133.7
Memory CD4 T-cell TFH nTPM: 88.7
Samples: 4
Max nTPM: 142.1
Min nTPM: 61.2
RHH5300_R3666
82.8
RHH5236_R3608
142.1
RHH5265_R3637
61.2
RHH5208_R3579
68.8
Memory CD4 T-cell Th1 nTPM: 86.3
Samples: 4
Max nTPM: 117.7
Min nTPM: 65.9
RHH5210_R3581
65.9
RHH5302_R3668
117.7
RHH5238_R3610
77.0
RHH5267_R3639
84.4
Memory CD4 T-cell Th1/Th17 nTPM: 104.7
Samples: 4
Max nTPM: 140.5
Min nTPM: 70.9
RHH5303_R3669
140.5
RHH5211_R3582
117.3
RHH5239_R3611
90.0
RHH5268_R3640
70.9
Memory CD4 T-cell Th17 nTPM: 74.7
Samples: 4
Max nTPM: 100.3
Min nTPM: 41.8
RHH5304_R3670
100.3
RHH5212_R3583
94.0
RHH5240_R3612
62.6
RHH5269_R3641
41.8
Memory CD4 T-cell Th2 nTPM: 91.9
Samples: 4
Max nTPM: 104.0
Min nTPM: 76.3
RHH5305_R3671
99.3
RHH5213_R3584
88.1
RHH5241_R3613
104.0
RHH5270_R3642
76.3
Naive CD4 T-cell nTPM: 58.6
Samples: 4
Max nTPM: 71.9
Min nTPM: 48.0
RHH5306_R3672
71.9
RHH5214_R3585
59.3
RHH5242_R3614
48.0
RHH5271_R3643
55.3
Naive CD8 T-cell nTPM: 67.2
Samples: 4
Max nTPM: 69.3
Min nTPM: 61.0
RHH5201_R3572
69.2
RHH5229_R3601
61.0
RHH5258_R3630
69.3
RHH5287_R3659
69.1
Non-Vd2 gdTCR nTPM: 102.6
Samples: 4
Max nTPM: 153.3
Min nTPM: 68.7
RHH5235_R3607
68.7
RHH5264_R3636
97.9
RHH5207_R3578
90.4
RHH5299_R3665
153.3
T-reg nTPM: 91.4
Samples: 4
Max nTPM: 103.2
Min nTPM: 84.2
RHH5301_R3667
88.5
RHH5237_R3609
103.2
RHH5266_R3638
84.2
RHH5209_R3580
89.7
Terminal effector memory CD4 T-cell nTPM: 86.6
Samples: 2
Max nTPM: 93.7
Min nTPM: 79.4
RHH5243_R3615
79.4
RHH5272_R3644
93.7
Terminal effector memory CD8 T-cell nTPM: 118.1
Samples: 4
Max nTPM: 179.2
Min nTPM: 83.9
RHH5232_R3604
101.1
RHH5204_R3575
179.2
RHH5261_R3633
83.9
RHH5296_R3662
108.1
Vd2 gdTCR nTPM: 114.2
Samples: 4
Max nTPM: 158.1
Min nTPM: 80.6
RHH5234_R3606
95.9
RHH5206_R3577
158.1
RHH5263_R3635
80.6
RHH5298_R3664
122.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
