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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
90.7
nTPM
Monaco:
297.9
nTPM
Schmiedel:
14.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
90.7
HPA sample
nTPM
gdT-cell nTPM: 90.7
Samples: 6
Max nTPM: 123.5
Min nTPM: 64.1
P10809_1007
114.7
P10809_1022
74.7
P10809_1041
123.5
P10809_1060
64.1
P10809_1077
86.3
P10809_1098
80.7
MAIT T-cell nTPM: 9.7
Samples: 6
Max nTPM: 13.0
Min nTPM: 5.4
P10809_1006
10.2
P10809_1024
9.2
P10809_1043
11.6
P10809_1062
5.4
P10809_1083
8.7
P10809_1097
13.0
Memory CD4 T-cell nTPM: 8.6
Samples: 6
Max nTPM: 18.2
Min nTPM: 2.7
P10809_1014
2.7
P10809_1026
4.0
P10809_1045
7.7
P10809_1064
13.8
P10809_1086
18.2
P10809_1113
5.0
Memory CD8 T-cell nTPM: 41.0
Samples: 5
Max nTPM: 54.6
Min nTPM: 22.3
P10809_1012
27.4
P10809_1027
49.8
P10809_1046
50.9
P10809_1065
54.6
P10809_1111
22.3
Naive CD4 T-cell nTPM: 3.5
Samples: 6
Max nTPM: 10.1
Min nTPM: 0.3
P10809_1015
2.0
P10809_1030
0.3
P10809_1049
4.5
P10809_1068
2.0
P10809_1085
10.1
P10809_1112
2.3
Naive CD8 T-cell nTPM: 37.0
Samples: 6
Max nTPM: 75.3
Min nTPM: 7.2
P10809_1016
7.2
P10809_1031
25.4
P10809_1050
47.5
P10809_1069
50.1
P10809_1087
75.3
P10809_1110
16.4
T-reg nTPM: 4.5
Samples: 6
Max nTPM: 6.2
Min nTPM: 1.5
P10809_1018
6.2
P10809_1037
6.2
P10809_1056
3.9
P10809_1075
1.5
P10809_1094
4.3
P10809_1106
4.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
297.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 14.0
Samples: 4
Max nTPM: 17.9
Min nTPM: 11.0
RHH5202_R3573
11.9
RHH5230_R3602
11.0
RHH5259_R3631
15.0
RHH5288_R3660
17.9
Effector memory CD8 T-cell nTPM: 127.9
Samples: 4
Max nTPM: 178.8
Min nTPM: 76.9
RHH5203_R3574
76.9
RHH5231_R3603
178.8
RHH5260_R3632
116.4
RHH5289_R3661
139.4
MAIT T-cell nTPM: 29.9
Samples: 4
Max nTPM: 38.0
Min nTPM: 20.7
RHH5233_R3605
26.8
RHH5205_R3576
38.0
RHH5262_R3634
20.7
RHH5297_R3663
34.1
Memory CD4 T-cell TFH nTPM: 10.1
Samples: 4
Max nTPM: 18.0
Min nTPM: 5.5
RHH5300_R3666
9.1
RHH5236_R3608
5.5
RHH5265_R3637
7.8
RHH5208_R3579
18.0
Memory CD4 T-cell Th1 nTPM: 14.7
Samples: 4
Max nTPM: 21.8
Min nTPM: 8.1
RHH5210_R3581
21.8
RHH5302_R3668
10.1
RHH5238_R3610
18.7
RHH5267_R3639
8.1
Memory CD4 T-cell Th1/Th17 nTPM: 18.8
Samples: 4
Max nTPM: 29.1
Min nTPM: 11.4
RHH5303_R3669
14.3
RHH5211_R3582
20.4
RHH5239_R3611
29.1
RHH5268_R3640
11.4
Memory CD4 T-cell Th17 nTPM: 12.9
Samples: 4
Max nTPM: 16.4
Min nTPM: 9.9
RHH5304_R3670
16.4
RHH5212_R3583
9.9
RHH5240_R3612
12.5
RHH5269_R3641
12.9
Memory CD4 T-cell Th2 nTPM: 14.1
Samples: 4
Max nTPM: 16.5
Min nTPM: 10.9
RHH5305_R3671
10.9
RHH5213_R3584
16.5
RHH5241_R3613
12.9
RHH5270_R3642
16.2
Naive CD4 T-cell nTPM: 9.5
Samples: 4
Max nTPM: 13.8
Min nTPM: 0.9
RHH5306_R3672
10.1
RHH5214_R3585
13.0
RHH5242_R3614
13.8
RHH5271_R3643
0.9
Naive CD8 T-cell nTPM: 8.7
Samples: 4
Max nTPM: 16.1
Min nTPM: 2.4
RHH5201_R3572
5.6
RHH5229_R3601
16.1
RHH5258_R3630
10.6
RHH5287_R3659
2.4
Non-Vd2 gdTCR nTPM: 298.0
Samples: 4
Max nTPM: 388.9
Min nTPM: 217.3
RHH5235_R3607
217.3
RHH5264_R3636
286.0
RHH5207_R3578
388.9
RHH5299_R3665
299.6
T-reg nTPM: 16.2
Samples: 4
Max nTPM: 19.3
Min nTPM: 11.9
RHH5301_R3667
11.9
RHH5237_R3609
14.6
RHH5266_R3638
18.9
RHH5209_R3580
19.3
Terminal effector memory CD4 T-cell nTPM: 107.3
Samples: 2
Max nTPM: 156.5
Min nTPM: 58.0
RHH5243_R3615
156.5
RHH5272_R3644
58.0
Terminal effector memory CD8 T-cell nTPM: 266.9
Samples: 4
Max nTPM: 312.2
Min nTPM: 219.7
RHH5232_R3604
312.2
RHH5204_R3575
288.3
RHH5261_R3633
219.7
RHH5296_R3662
247.2
Vd2 gdTCR nTPM: 108.8
Samples: 4
Max nTPM: 215.0
Min nTPM: 60.8
RHH5234_R3606
68.2
RHH5206_R3577
215.0
RHH5263_R3635
91.3
RHH5298_R3664
60.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
