HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:25.4 nTPM
HPA Brain:50.0 nTPM
GTEx:25.4 nTPM
FANTOM5:21.7 Scaled Tags Per Million
Pig:11.6 nTPM
Mouse:22.2 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007847Antibody HPA023620
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 50.0
Sample id Sample description nTPM
Hippocampus
nTPM: 40.2
2621 Female, age 67, right hemisphere 47.3
1855 Male, age 76, left hemisphere 42.6
1911 Female, age 85, right hemisphere 38.8
2529 Female, age 94, left hemisphere 38.7
2148 Female, age 91, left hemisphere 38.5
1898 Male, age 80, left hemisphere 35.2
Dentate gyrus
nTPM: 37.5
2531 Female, age 67, both hemispheres 42.2
1927 Female, age 91, both hemispheres 39.4
2246 Female, age 85, both hemispheres 39.1
2010 Male, age 76, both hemispheres 35.6
2528 Male, age 74, both hemispheres 34.9
2530 Female, age 94, left hemisphere 33.9
Entorhinal gyrus
nTPM: 50.0
2613 Female, age 94, left hemisphere 64.6
2686 Male, age 75, right hemisphere 59.4
2764 Male, age 80, right hemisphere 56.2
1787 Male, age 76, left hemisphere 47.4
1938 Female, age 85, left hemisphere 39.4
2117 Female, age 91, right hemisphere 33.0
Hippocampus, CA1
nTPM: 37.8
2082 Female, age 91, right hemisphere 43.0
2527 Male, age 74, both hemispheres 37.8
1873 Female, age 85, both hemispheres 36.8
2749 Male, age 80, left hemisphere 36.3
2045 Male, age 76, both hemispheres 35.5
Hippocampus, CA2
nTPM: 40.4
2437 Female, age 94, left hemisphere 47.6
2113 Female, age 91, right hemisphere 41.3
1940 Female, age 85, left hemisphere 41.0
1892 Male, age 76, both hemispheres 40.6
1963 Male, age 80, left hemisphere 38.1
2249 Male, age 74, both hemispheres 33.6
Hippocampus, CA3
nTPM: 39.3
2861 Female, age 67, both hemispheres 46.6
2436 Male, age 74, both hemispheres 40.8
1867 Male, age 76, both hemispheres 38.9
2137 Male, age 80, left hemisphere 38.2
2620 Female, age 94, left hemisphere 37.0
1891 Female, age 85, both hemispheres 34.1
Parahippocampal cortex
nTPM: 48.5
2622 Female, age 67, right hemisphere 65.4
2693 Female, age 94, both hemispheres 53.4
2245 Female, age 91, both hemispheres 51.4
2018 Male, age 76, both hemispheres 47.8
2692 Male, age 74, both hemispheres 47.3
1850 Male, age 80, both hemispheres 45.7
2532 Female, age 72, left hemisphere 45.7
2250 Female, age 67, right hemisphere 43.0
1933 Female, age 85, both hemispheres 42.8
1990 Female, age 91, right hemisphere 42.4
Perirhinal gyrus
nTPM: 47.3
2848 Male, age 76, right hemisphere 50.3
2521 Female, age 94, right hemisphere 49.5
1794 Male, age 80, right hemisphere 48.3
1847 Female, age 91, left hemisphere 46.0
1841 Female, age 85, right hemisphere 42.6
Subiculum
nTPM: 40.3
2438 Female, age 94, left hemisphere 49.2
2619 Male, age 74, both hemispheres 47.2
2042 Male, age 76, both hemispheres 38.4
1977 Female, age 85, both hemispheres 38.0
2729 Female, age 91, right hemisphere 34.4
1901 Male, age 80, both hemispheres 34.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.4
Samples: 197

Max nTPM: 42.7
Min nTPM: 10.2
Std nTPM: 6.4
Median nTPM: 24.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 42.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 41.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 40.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 40.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 40.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 40.2
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 39.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 37.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 36.9
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 36.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 36.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.7
FF:10153-102I9 76 years, female 26.8
FF:10169-103B7 60 years, female 16.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.6
Pig sample Sample description nTPM
Subiculum
nTPM: 11.2
Samples: 4

Max nTPM: 13.2
Min nTPM: 9.3
Sample A Female 13.2
Sample B Female 10.7
Sample C Male 11.5
Sample D Male 9.3
Dorsal hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 10.0
Min nTPM: 8.6
Sample A Female 9.4
Sample B Female 9.3
Sample C Male 10.0
Sample D Male 8.6
Entorhinal cortex
nTPM: 11.6
Samples: 4

Max nTPM: 12.8
Min nTPM: 10.6
Sample A Female 11.5
Sample B Female 10.6
Sample C Male 12.8
Sample D Male 11.3
Ventral hippocampus
nTPM: 11.1
Samples: 4

Max nTPM: 13.9
Min nTPM: 9.1
Sample A Female 10.4
Sample B Female 9.1
Sample C Male 13.9
Sample D Male 10.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.1
Samples: 4

Max nTPM: 24.7
Min nTPM: 19.6
Sample A Male 23.0
Sample B Male 24.7
Sample C Female 19.6
Sample D Female 21.2
Hippocampal formation
nTPM: 18.9
Samples: 4

Max nTPM: 20.8
Min nTPM: 16.4
Sample A Male 20.8
Sample B Male 18.5
Sample C Female 16.4
Sample D Female 19.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
68844624 Antisense, RP_050222_02_A12, Mouse strain C57BL/6J (56 days, male) 4.7

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