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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
230.9
nTPM
FANTOM5:
263.0
Scaled Tags Per Million
Pig:
251.5
nTPM
Allen mouse:
14.0
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
230.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 160.0
1984
Male, age 76, both hemispheres
185.9
2090
Male, age 80, both hemispheres
170.9
2188
Female, age 91, both hemispheres
150.7
2301
Female, age 85, both hemispheres
132.7
Dorsal cochlear nucleus nTPM: 196.0
2802
Male, age 74, right hemisphere
261.2
2058
Male, age 76, both hemispheres
202.1
2370
Male, age 61, both hemispheres
175.5
2378
Male, age 80, both hemispheres
172.7
2187
Female, age 91, both hemispheres
168.5
Dorsal tegmental nucleus nTPM: 171.6
2083
Male, age 80, both hemispheres
214.7
2326
Male, age 74, both hemispheres
195.8
1936
Male, age 76, left hemisphere
148.2
2358
Male, age 61, both hemispheres
127.8
Dorsolateral tegmental area nTPM: 185.0
2654
Male, age 80, both hemispheres
221.0
2360
Male, age 74, both hemispheres
195.8
2751
Female, age 85, both hemispheres
188.5
2141
Male, age 76, both hemispheres
179.3
2337
Male, age 61, both hemispheres
140.2
Kolliker-Fuse nucleus nTPM: 180.1
2163
Male, age 80, both hemispheres
207.6
2315
Male, age 76, right hemisphere
178.2
2793
Female, age 91, left hemisphere
154.6
Lateral lemniscal nuclei nTPM: 201.9
2169
Male, age 76, both hemispheres
249.4
2036
Male, age 80, both hemispheres
225.6
2746
Female, age 85, left hemisphere
210.6
2453
Male, age 74, right hemisphere
188.5
2320
Female, age 91, left hemisphere
135.3
Lateral parabrachial nucleus nTPM: 178.1
2139
Female, age 85, right hemisphere
235.6
2013
Male, age 80, both hemispheres
186.8
2790
Male, age 61, both hemispheres
150.4
2792
Male, age 76, both hemispheres
139.4
Lateral vestibular nucleus nTPM: 173.2
2184
Male, age 76, both hemispheres
185.7
2311
Male, age 80, both hemispheres
160.7
Locus coeruleus nTPM: 226.6
2123
Female, age 91, both hemispheres
299.2
2014
Male, age 55, unknown
267.6
2317
Female, age 72, unknown
228.9
1980
Male, age 76, both hemispheres
209.2
2788
Male, age 74, unknown
201.0
2162
Male, age 80, both hemispheres
192.3
2720
Male, age 74, both hemispheres
188.0
Medial parabrachial nucleus nTPM: 171.2
2170
Female, age 91, both hemispheres
193.2
2854
Male, age 80, both hemispheres
178.6
2463
Female, age 85, right hemisphere
171.8
2786
Male, age 76, both hemispheres
165.7
2156
Male, age 61, both hemispheres
146.7
Medial periolivary nuclei nTPM: 200.7
2063
Male, age 76, both hemispheres
273.9
2171
Female, age 85, both hemispheres
247.6
2791
Male, age 74, right hemisphere
198.7
2081
Male, age 80, both hemispheres
148.2
2458
Female, age 91, both hemispheres
135.2
Motor facial nucleus nTPM: 193.6
2062
Male, age 76, both hemispheres
300.8
2365
Male, age 74, right hemisphere
207.2
2795
Female, age 91, both hemispheres
190.8
2126
Male, age 61, both hemispheres
170.5
2697
Female, age 85, both hemispheres
148.6
2327
Male, age 80, both hemispheres
143.5
Motor trigeminal nucleus nTPM: 162.2
2560
Male, age 74, both hemispheres
191.1
2079
Male, age 80, both hemispheres
178.7
2309
Male, age 76, both hemispheres
155.2
2335
Male, age 61, both hemispheres
149.6
2321
Female, age 91, both hemispheres
136.4
Nuclei of the trapezoid body nTPM: 226.9
1983
Male, age 76, both hemispheres
281.3
2159
Male, age 61, both hemispheres
264.8
2735
Female, age 85, both hemispheres
260.4
2166
Male, age 80, both hemispheres
173.6
2368
Female, age 91, both hemispheres
154.3
Nucleus raphe magnus nTPM: 221.3
2160
Male, age 61, both hemispheres
328.7
2172
Female, age 85, both hemispheres
245.2
2051
Male, age 76, both hemispheres
223.5
2455
Male, age 74, both hemispheres
208.1
2328
Male, age 80, both hemispheres
169.0
2459
Female, age 91, both hemispheres
153.1
Paramedian reticular nucleus nTPM: 206.3
2050
Female, age 85, both hemispheres
236.7
2057
Male, age 80, both hemispheres
235.0
2313
Male, age 61, both hemispheres
190.0
2052
Male, age 76, both hemispheres
163.4
Pedunculopontine tegmental nucleus nTPM: 171.6
1921
Female, age 85, both hemispheres
187.8
2334
Male, age 80, both hemispheres
184.3
2338
Male, age 61, both hemispheres
142.6
Pontine nuclei nTPM: 230.9
2727
Male, age 61, right hemisphere
315.9
1863
Male, age 55, unknown
296.9
2787
Female, age 85, both hemispheres
292.1
2109
Female, age 72, unknown
250.5
1968
Male, age 76, left hemisphere
232.5
2454
Male, age 74, left hemisphere
164.3
2115
Male, age 80, left hemisphere
158.0
2319
Female, age 91, both hemispheres
137.1
Pontine raphe nucleus nTPM: 198.9
2122
Female, age 85, midline
224.0
2853
Male, age 76, midline
173.8
Posteroventral cochlear nucleus nTPM: 176.6
2752
Female, age 85, both hemispheres
222.7
2070
Male, age 76, both hemispheres
197.5
2371
Male, age 61, both hemispheres
171.6
2341
Male, age 80, both hemispheres
162.5
2135
Female, age 91, both hemispheres
128.9
Principal sensory trigeminal nucleus nTPM: 195.9
2158
Male, age 61, both hemispheres
274.0
2008
Male, age 80, left hemisphere
211.3
2324
Male, age 76, both hemispheres
170.8
2367
Female, age 91, left hemisphere
127.5
Reticular pontine nucleus, caudal nTPM: 183.4
2092
Male, age 76, both hemispheres
237.4
2332
Male, age 80, right hemisphere
175.7
2559
Male, age 74, both hemispheres
175.0
2457
Female, age 91, both hemispheres
145.3
Reticular pontine nucleus, oral nTPM: 182.3
2012
Female, age 85, both hemispheres
216.1
2361
Male, age 74, both hemispheres
203.0
1939
Male, age 80, both hemispheres
193.4
2167
Male, age 76, both hemispheres
172.9
2366
Female, age 91, both hemispheres
126.1
Reticulotegmental nucleus nTPM: 179.1
2452
Male, age 74, both hemispheres
203.3
2325
Male, age 76, both hemispheres
178.8
2333
Male, age 80, both hemispheres
173.8
2322
Female, age 91, both hemispheres
160.5
Spinal trigeminal nucleus, oral nTPM: 187.4
2164
Male, age 80, both hemispheres
197.4
2737
Female, age 85, both hemispheres
194.7
1978
Male, age 76, both hemispheres
170.2
Subcoeruleus area nTPM: 187.5
2451
Male, age 74, both hemispheres
217.9
2323
Female, age 91, left hemisphere
196.7
2089
Male, age 76, left hemisphere
179.2
2369
Female, age 85, left hemisphere
172.9
1958
Male, age 80, both hemispheres
170.6
Superior olive nTPM: 191.7
1875
Female, age 85, both hemispheres
229.1
2020
Male, age 76, both hemispheres
214.6
2364
Male, age 74, right hemisphere
207.1
2329
Male, age 80, right hemisphere
160.1
2561
Female, age 91, both hemispheres
147.4
Ventral periolivary nuclei nTPM: 198.1
2165
Male, age 80, both hemispheres
217.3
2130
Female, age 85, both hemispheres
213.9
2023
Male, age 76, both hemispheres
211.7
2794
Female, age 91, left hemisphere
149.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 178.6
2449
Male, age 74, both hemispheres
208.5
1959
Male, age 76, both hemispheres
190.2
2840
Female, age 85, both hemispheres
189.8
2161
Male, age 80, both hemispheres
181.1
2456
Female, age 91, both hemispheres
153.0
2359
Male, age 61, both hemispheres
149.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
251.5
Pig sample
Sample description
nTPM
Pons nTPM: 251.5
Samples: 4
Max nTPM: 295.3
Min nTPM: 202.6
Sample A
Female
295.3
Sample B
Female
202.6
Sample C
Male
241.5
Sample D
Male
266.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
