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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
376.2
nTPM
Monaco:
544.7
nTPM
Schmiedel:
224.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
376.2
HPA sample
nTPM
gdT-cell nTPM: 243.2
Samples: 6
Max nTPM: 297.5
Min nTPM: 206.8
P10809_1007
222.6
P10809_1022
297.5
P10809_1041
254.8
P10809_1060
206.8
P10809_1077
226.1
P10809_1098
251.3
MAIT T-cell nTPM: 284.3
Samples: 6
Max nTPM: 364.2
Min nTPM: 208.2
P10809_1006
267.3
P10809_1024
364.2
P10809_1043
287.3
P10809_1062
294.5
P10809_1083
208.2
P10809_1097
284.1
Memory CD4 T-cell nTPM: 270.1
Samples: 6
Max nTPM: 289.9
Min nTPM: 247.2
P10809_1014
277.1
P10809_1026
283.1
P10809_1045
289.9
P10809_1064
261.1
P10809_1086
247.2
P10809_1113
261.9
Memory CD8 T-cell nTPM: 269.1
Samples: 5
Max nTPM: 301.5
Min nTPM: 250.1
P10809_1012
259.3
P10809_1027
268.5
P10809_1046
301.5
P10809_1065
250.1
P10809_1111
265.9
Naive CD4 T-cell nTPM: 280.8
Samples: 6
Max nTPM: 323.8
Min nTPM: 259.6
P10809_1015
259.6
P10809_1030
281.1
P10809_1049
323.8
P10809_1068
280.9
P10809_1085
276.5
P10809_1112
262.7
Naive CD8 T-cell nTPM: 269.0
Samples: 6
Max nTPM: 327.5
Min nTPM: 213.5
P10809_1016
295.6
P10809_1031
273.7
P10809_1050
242.9
P10809_1069
327.5
P10809_1087
213.5
P10809_1110
261.0
T-reg nTPM: 376.2
Samples: 6
Max nTPM: 414.6
Min nTPM: 340.1
P10809_1018
340.1
P10809_1037
405.6
P10809_1056
379.3
P10809_1075
353.1
P10809_1094
364.6
P10809_1106
414.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
544.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 475.2
Samples: 4
Max nTPM: 672.7
Min nTPM: 198.4
RHH5202_R3573
506.4
RHH5230_R3602
523.1
RHH5259_R3631
198.4
RHH5288_R3660
672.7
Effector memory CD8 T-cell nTPM: 530.5
Samples: 4
Max nTPM: 670.2
Min nTPM: 349.4
RHH5203_R3574
670.2
RHH5231_R3603
560.1
RHH5260_R3632
349.4
RHH5289_R3661
542.2
MAIT T-cell nTPM: 540.1
Samples: 4
Max nTPM: 624.0
Min nTPM: 327.4
RHH5233_R3605
624.0
RHH5205_R3576
327.4
RHH5262_R3634
604.0
RHH5297_R3663
604.9
Memory CD4 T-cell TFH nTPM: 544.4
Samples: 4
Max nTPM: 648.2
Min nTPM: 465.5
RHH5300_R3666
648.2
RHH5236_R3608
548.2
RHH5265_R3637
465.5
RHH5208_R3579
515.7
Memory CD4 T-cell Th1 nTPM: 457.0
Samples: 4
Max nTPM: 751.6
Min nTPM: 230.0
RHH5210_R3581
468.5
RHH5302_R3668
751.6
RHH5238_R3610
230.0
RHH5267_R3639
378.0
Memory CD4 T-cell Th1/Th17 nTPM: 486.0
Samples: 4
Max nTPM: 760.8
Min nTPM: 272.9
RHH5303_R3669
760.8
RHH5211_R3582
556.4
RHH5239_R3611
272.9
RHH5268_R3640
353.9
Memory CD4 T-cell Th17 nTPM: 393.2
Samples: 4
Max nTPM: 528.0
Min nTPM: 313.9
RHH5304_R3670
528.0
RHH5212_R3583
396.4
RHH5240_R3612
313.9
RHH5269_R3641
334.6
Memory CD4 T-cell Th2 nTPM: 520.9
Samples: 4
Max nTPM: 685.9
Min nTPM: 355.7
RHH5305_R3671
609.0
RHH5213_R3584
355.7
RHH5241_R3613
685.9
RHH5270_R3642
432.8
Naive CD4 T-cell nTPM: 539.3
Samples: 4
Max nTPM: 663.7
Min nTPM: 377.6
RHH5306_R3672
663.7
RHH5214_R3585
481.6
RHH5242_R3614
634.1
RHH5271_R3643
377.6
Naive CD8 T-cell nTPM: 542.6
Samples: 4
Max nTPM: 643.6
Min nTPM: 289.4
RHH5201_R3572
631.1
RHH5229_R3601
289.4
RHH5258_R3630
643.6
RHH5287_R3659
606.1
Non-Vd2 gdTCR nTPM: 498.6
Samples: 4
Max nTPM: 659.8
Min nTPM: 300.4
RHH5235_R3607
300.4
RHH5264_R3636
487.6
RHH5207_R3578
546.7
RHH5299_R3665
659.8
T-reg nTPM: 507.6
Samples: 4
Max nTPM: 736.0
Min nTPM: 338.7
RHH5301_R3667
736.0
RHH5237_R3609
572.0
RHH5266_R3638
383.6
RHH5209_R3580
338.7
Terminal effector memory CD4 T-cell nTPM: 455.3
Samples: 2
Max nTPM: 542.9
Min nTPM: 367.7
RHH5243_R3615
367.7
RHH5272_R3644
542.9
Terminal effector memory CD8 T-cell nTPM: 544.7
Samples: 4
Max nTPM: 652.6
Min nTPM: 368.4
RHH5232_R3604
643.8
RHH5204_R3575
514.0
RHH5261_R3633
368.4
RHH5296_R3662
652.6
Vd2 gdTCR nTPM: 529.7
Samples: 4
Max nTPM: 600.9
Min nTPM: 382.9
RHH5234_R3606
584.5
RHH5206_R3577
600.9
RHH5263_R3635
382.9
RHH5298_R3664
550.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.