HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:6.8 nTPM
HPA Brain:30.1 nTPM
GTEx:6.8 nTPM
FANTOM5:29.8 Scaled Tags Per Million
Pig:33.6 nTPM
Mouse:20.1 nTPM
Allen mouse:7.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017678Antibody HPA017682
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.1
Sample id Sample description nTPM
Hippocampus
nTPM: 28.9
1855 Male, age 76, left hemisphere 29.7
2621 Female, age 67, right hemisphere 29.6
2529 Female, age 94, left hemisphere 29.2
1911 Female, age 85, right hemisphere 29.1
2148 Female, age 91, left hemisphere 28.3
1898 Male, age 80, left hemisphere 27.8
Dentate gyrus
nTPM: 28.8
2246 Female, age 85, both hemispheres 31.1
1927 Female, age 91, both hemispheres 29.3
2531 Female, age 67, both hemispheres 29.0
2010 Male, age 76, both hemispheres 28.2
2530 Female, age 94, left hemisphere 27.9
2528 Male, age 74, both hemispheres 27.3
Entorhinal gyrus
nTPM: 29.5
2613 Female, age 94, left hemisphere 35.1
1938 Female, age 85, left hemisphere 32.5
1787 Male, age 76, left hemisphere 28.7
2117 Female, age 91, right hemisphere 28.7
2764 Male, age 80, right hemisphere 26.8
2686 Male, age 75, right hemisphere 25.1
Hippocampus, CA1
nTPM: 28.7
2749 Male, age 80, left hemisphere 31.2
1873 Female, age 85, both hemispheres 30.5
2045 Male, age 76, both hemispheres 28.2
2527 Male, age 74, both hemispheres 27.3
2082 Female, age 91, right hemisphere 26.2
Hippocampus, CA2
nTPM: 27.7
1940 Female, age 85, left hemisphere 29.0
1892 Male, age 76, both hemispheres 28.1
1963 Male, age 80, left hemisphere 28.0
2249 Male, age 74, both hemispheres 27.4
2113 Female, age 91, right hemisphere 27.1
2437 Female, age 94, left hemisphere 26.6
Hippocampus, CA3
nTPM: 29.6
2620 Female, age 94, left hemisphere 33.2
2137 Male, age 80, left hemisphere 31.8
1891 Female, age 85, both hemispheres 29.6
2436 Male, age 74, both hemispheres 29.5
2861 Female, age 67, both hemispheres 27.5
1867 Male, age 76, both hemispheres 25.9
Parahippocampal cortex
nTPM: 28.8
2245 Female, age 91, both hemispheres 30.7
1850 Male, age 80, both hemispheres 30.5
2692 Male, age 74, both hemispheres 29.8
1990 Female, age 91, right hemisphere 29.5
2622 Female, age 67, right hemisphere 28.9
2532 Female, age 72, left hemisphere 28.7
2693 Female, age 94, both hemispheres 28.7
2250 Female, age 67, right hemisphere 28.6
1933 Female, age 85, both hemispheres 27.9
2018 Male, age 76, both hemispheres 24.7
Perirhinal gyrus
nTPM: 30.1
1841 Female, age 85, right hemisphere 32.2
1847 Female, age 91, left hemisphere 31.6
2521 Female, age 94, right hemisphere 30.1
1794 Male, age 80, right hemisphere 28.6
2848 Male, age 76, right hemisphere 28.0
Subiculum
nTPM: 29.5
2438 Female, age 94, left hemisphere 34.6
1977 Female, age 85, both hemispheres 31.7
2042 Male, age 76, both hemispheres 28.4
2729 Female, age 91, right hemisphere 28.2
1901 Male, age 80, both hemispheres 28.0
2619 Male, age 74, both hemispheres 26.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.8
Samples: 197

Max nTPM: 10.0
Min nTPM: 3.3
Std nTPM: 1.2
Median nTPM: 6.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 10.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 9.9
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 9.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 9.8
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 9.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 9.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 9.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 9.1
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 9.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 9.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 9.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.8
FF:10153-102I9 76 years, female 32.5
FF:10169-103B7 60 years, female 27.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.6
Pig sample Sample description nTPM
Subiculum
nTPM: 31.7
Samples: 4

Max nTPM: 36.7
Min nTPM: 28.6
Sample A Female 36.7
Sample B Female 28.6
Sample C Male 30.1
Sample D Male 31.2
Dorsal hippocampus
nTPM: 31.4
Samples: 4

Max nTPM: 35.9
Min nTPM: 27.1
Sample A Female 33.0
Sample B Female 29.6
Sample C Male 35.9
Sample D Male 27.1
Entorhinal cortex
nTPM: 33.6
Samples: 4

Max nTPM: 39.4
Min nTPM: 30.2
Sample A Female 39.4
Sample B Female 30.2
Sample C Male 33.5
Sample D Male 31.2
Ventral hippocampus
nTPM: 28.8
Samples: 4

Max nTPM: 32.2
Min nTPM: 25.7
Sample A Female 27.1
Sample B Female 25.7
Sample C Male 32.2
Sample D Male 30.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.0
Samples: 4

Max nTPM: 23.9
Min nTPM: 18.6
Sample A Male 19.0
Sample B Male 18.6
Sample C Female 18.6
Sample D Female 23.9
Hippocampal formation
nTPM: 19.7
Samples: 4

Max nTPM: 23.3
Min nTPM: 15.9
Sample A Male 15.9
Sample B Male 23.3
Sample C Female 22.9
Sample D Female 16.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.2
74882216 Antisense, RP_060315_04_E06, Mouse strain C57BL/6J (56 days, male) 7.3
69608851 Antisense, RP_050426_04_D02, Mouse strain C57BL/6J (56 days, male) 7.0

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