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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
173.2
nTPM
Monaco:
427.1
nTPM
Schmiedel:
165.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
173.2
HPA sample
nTPM
gdT-cell nTPM: 97.9
Samples: 6
Max nTPM: 114.7
Min nTPM: 74.0
P10809_1007
74.0
P10809_1022
114.7
P10809_1041
91.9
P10809_1060
113.5
P10809_1077
91.9
P10809_1098
101.5
MAIT T-cell nTPM: 161.8
Samples: 6
Max nTPM: 210.7
Min nTPM: 125.8
P10809_1006
132.7
P10809_1024
186.9
P10809_1043
125.8
P10809_1062
210.7
P10809_1083
156.3
P10809_1097
158.6
Memory CD4 T-cell nTPM: 173.2
Samples: 6
Max nTPM: 203.6
Min nTPM: 146.9
P10809_1014
158.1
P10809_1026
175.4
P10809_1045
203.6
P10809_1064
146.9
P10809_1086
160.3
P10809_1113
194.9
Memory CD8 T-cell nTPM: 125.7
Samples: 5
Max nTPM: 146.7
Min nTPM: 110.5
P10809_1012
116.4
P10809_1027
133.2
P10809_1046
121.6
P10809_1065
110.5
P10809_1111
146.7
Naive CD4 T-cell nTPM: 119.3
Samples: 6
Max nTPM: 128.5
Min nTPM: 104.2
P10809_1015
124.8
P10809_1030
115.7
P10809_1049
128.5
P10809_1068
126.4
P10809_1085
104.2
P10809_1112
116.4
Naive CD8 T-cell nTPM: 102.0
Samples: 6
Max nTPM: 115.1
Min nTPM: 90.7
P10809_1016
97.2
P10809_1031
109.0
P10809_1050
98.2
P10809_1069
115.1
P10809_1087
90.7
P10809_1110
101.7
T-reg nTPM: 148.1
Samples: 6
Max nTPM: 167.4
Min nTPM: 107.8
P10809_1018
144.9
P10809_1037
167.4
P10809_1056
150.8
P10809_1075
107.8
P10809_1094
156.4
P10809_1106
161.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
427.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 378.8
Samples: 4
Max nTPM: 447.2
Min nTPM: 326.4
RHH5202_R3573
399.0
RHH5230_R3602
342.6
RHH5259_R3631
326.4
RHH5288_R3660
447.2
Effector memory CD8 T-cell nTPM: 290.1
Samples: 4
Max nTPM: 351.6
Min nTPM: 237.3
RHH5203_R3574
317.4
RHH5231_R3603
237.3
RHH5260_R3632
254.1
RHH5289_R3661
351.6
MAIT T-cell nTPM: 288.7
Samples: 4
Max nTPM: 313.0
Min nTPM: 266.3
RHH5233_R3605
313.0
RHH5205_R3576
266.3
RHH5262_R3634
298.7
RHH5297_R3663
276.8
Memory CD4 T-cell TFH nTPM: 396.0
Samples: 4
Max nTPM: 467.3
Min nTPM: 358.5
RHH5300_R3666
358.5
RHH5236_R3608
364.2
RHH5265_R3637
467.3
RHH5208_R3579
393.8
Memory CD4 T-cell Th1 nTPM: 366.3
Samples: 4
Max nTPM: 421.9
Min nTPM: 323.6
RHH5210_R3581
376.7
RHH5302_R3668
421.9
RHH5238_R3610
323.6
RHH5267_R3639
343.0
Memory CD4 T-cell Th1/Th17 nTPM: 386.5
Samples: 4
Max nTPM: 444.2
Min nTPM: 312.7
RHH5303_R3669
444.2
RHH5211_R3582
442.3
RHH5239_R3611
312.7
RHH5268_R3640
346.6
Memory CD4 T-cell Th17 nTPM: 361.0
Samples: 4
Max nTPM: 395.3
Min nTPM: 312.4
RHH5304_R3670
395.3
RHH5212_R3583
378.8
RHH5240_R3612
312.4
RHH5269_R3641
357.3
Memory CD4 T-cell Th2 nTPM: 427.1
Samples: 4
Max nTPM: 458.8
Min nTPM: 361.9
RHH5305_R3671
456.8
RHH5213_R3584
430.8
RHH5241_R3613
458.8
RHH5270_R3642
361.9
Naive CD4 T-cell nTPM: 341.7
Samples: 4
Max nTPM: 369.1
Min nTPM: 302.7
RHH5306_R3672
302.7
RHH5214_R3585
329.6
RHH5242_R3614
369.1
RHH5271_R3643
365.3
Naive CD8 T-cell nTPM: 331.0
Samples: 4
Max nTPM: 376.2
Min nTPM: 216.1
RHH5201_R3572
376.2
RHH5229_R3601
216.1
RHH5258_R3630
371.2
RHH5287_R3659
360.6
Non-Vd2 gdTCR nTPM: 246.3
Samples: 4
Max nTPM: 267.5
Min nTPM: 228.7
RHH5235_R3607
228.7
RHH5264_R3636
253.1
RHH5207_R3578
267.5
RHH5299_R3665
236.0
T-reg nTPM: 331.3
Samples: 4
Max nTPM: 347.9
Min nTPM: 315.1
RHH5301_R3667
315.1
RHH5237_R3609
347.9
RHH5266_R3638
317.8
RHH5209_R3580
344.3
Terminal effector memory CD4 T-cell nTPM: 264.7
Samples: 2
Max nTPM: 295.0
Min nTPM: 234.4
RHH5243_R3615
234.4
RHH5272_R3644
295.0
Terminal effector memory CD8 T-cell nTPM: 234.5
Samples: 4
Max nTPM: 267.5
Min nTPM: 210.0
RHH5232_R3604
221.7
RHH5204_R3575
238.7
RHH5261_R3633
210.0
RHH5296_R3662
267.5
Vd2 gdTCR nTPM: 267.7
Samples: 4
Max nTPM: 308.2
Min nTPM: 166.5
RHH5234_R3606
299.5
RHH5206_R3577
166.5
RHH5263_R3635
308.2
RHH5298_R3664
296.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.