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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
41.5
nTPM
Monaco:
291.7
nTPM
Schmiedel:
619.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
41.5
HPA sample
nTPM
gdT-cell nTPM: 39.7
Samples: 6
Max nTPM: 60.5
Min nTPM: 25.7
P10809_1007
60.5
P10809_1022
33.8
P10809_1041
39.9
P10809_1060
25.7
P10809_1077
28.2
P10809_1098
50.0
MAIT T-cell nTPM: 31.5
Samples: 6
Max nTPM: 66.5
Min nTPM: 12.0
P10809_1006
66.5
P10809_1024
12.0
P10809_1043
35.3
P10809_1062
18.1
P10809_1083
18.6
P10809_1097
38.7
Memory CD4 T-cell nTPM: 30.8
Samples: 6
Max nTPM: 63.8
Min nTPM: 17.7
P10809_1014
63.8
P10809_1026
26.8
P10809_1045
31.3
P10809_1064
26.7
P10809_1086
17.7
P10809_1113
18.5
Memory CD8 T-cell nTPM: 41.5
Samples: 5
Max nTPM: 74.7
Min nTPM: 26.3
P10809_1012
74.7
P10809_1027
29.5
P10809_1046
44.3
P10809_1065
26.3
P10809_1111
32.7
Naive CD4 T-cell nTPM: 30.5
Samples: 6
Max nTPM: 51.5
Min nTPM: 19.2
P10809_1015
51.5
P10809_1030
24.1
P10809_1049
19.2
P10809_1068
30.9
P10809_1085
22.3
P10809_1112
34.8
Naive CD8 T-cell nTPM: 34.2
Samples: 6
Max nTPM: 68.8
Min nTPM: 11.6
P10809_1016
68.8
P10809_1031
41.7
P10809_1050
26.9
P10809_1069
21.2
P10809_1087
11.6
P10809_1110
34.8
T-reg nTPM: 33.0
Samples: 6
Max nTPM: 63.5
Min nTPM: 19.8
P10809_1018
63.5
P10809_1037
33.0
P10809_1056
19.8
P10809_1075
30.1
P10809_1094
27.1
P10809_1106
24.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
291.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 226.1
Samples: 4
Max nTPM: 361.2
Min nTPM: 86.1
RHH5202_R3573
86.1
RHH5230_R3602
272.4
RHH5259_R3631
361.2
RHH5288_R3660
184.5
Effector memory CD8 T-cell nTPM: 230.1
Samples: 4
Max nTPM: 387.8
Min nTPM: 79.8
RHH5203_R3574
163.6
RHH5231_R3603
289.2
RHH5260_R3632
387.8
RHH5289_R3661
79.8
MAIT T-cell nTPM: 193.7
Samples: 4
Max nTPM: 253.3
Min nTPM: 128.4
RHH5233_R3605
128.4
RHH5205_R3576
212.2
RHH5262_R3634
253.3
RHH5297_R3663
180.9
Memory CD4 T-cell TFH nTPM: 216.5
Samples: 4
Max nTPM: 263.7
Min nTPM: 103.4
RHH5300_R3666
258.5
RHH5236_R3608
263.7
RHH5265_R3637
240.4
RHH5208_R3579
103.4
Memory CD4 T-cell Th1 nTPM: 261.3
Samples: 4
Max nTPM: 351.9
Min nTPM: 149.6
RHH5210_R3581
206.6
RHH5302_R3668
149.6
RHH5238_R3610
336.9
RHH5267_R3639
351.9
Memory CD4 T-cell Th1/Th17 nTPM: 246.7
Samples: 4
Max nTPM: 314.0
Min nTPM: 80.2
RHH5303_R3669
80.2
RHH5211_R3582
314.0
RHH5239_R3611
297.2
RHH5268_R3640
295.3
Memory CD4 T-cell Th17 nTPM: 216.3
Samples: 4
Max nTPM: 295.9
Min nTPM: 118.9
RHH5304_R3670
118.9
RHH5212_R3583
295.9
RHH5240_R3612
172.6
RHH5269_R3641
277.9
Memory CD4 T-cell Th2 nTPM: 244.4
Samples: 4
Max nTPM: 313.8
Min nTPM: 119.7
RHH5305_R3671
260.0
RHH5213_R3584
313.8
RHH5241_R3613
119.7
RHH5270_R3642
283.9
Naive CD4 T-cell nTPM: 258.3
Samples: 4
Max nTPM: 302.4
Min nTPM: 191.6
RHH5306_R3672
281.0
RHH5214_R3585
258.2
RHH5242_R3614
191.6
RHH5271_R3643
302.4
Naive CD8 T-cell nTPM: 244.7
Samples: 4
Max nTPM: 298.8
Min nTPM: 86.6
RHH5201_R3572
86.6
RHH5229_R3601
298.0
RHH5258_R3630
295.4
RHH5287_R3659
298.8
Non-Vd2 gdTCR nTPM: 208.4
Samples: 4
Max nTPM: 314.1
Min nTPM: 76.9
RHH5235_R3607
314.1
RHH5264_R3636
146.8
RHH5207_R3578
76.9
RHH5299_R3665
295.6
T-reg nTPM: 291.7
Samples: 4
Max nTPM: 304.0
Min nTPM: 269.1
RHH5301_R3667
269.1
RHH5237_R3609
304.0
RHH5266_R3638
295.6
RHH5209_R3580
297.9
Terminal effector memory CD4 T-cell nTPM: 249.0
Samples: 2
Max nTPM: 284.9
Min nTPM: 213.1
RHH5243_R3615
284.9
RHH5272_R3644
213.1
Terminal effector memory CD8 T-cell nTPM: 192.8
Samples: 4
Max nTPM: 319.3
Min nTPM: 68.8
RHH5232_R3604
202.8
RHH5204_R3575
180.3
RHH5261_R3633
319.3
RHH5296_R3662
68.8
Vd2 gdTCR nTPM: 252.0
Samples: 4
Max nTPM: 336.1
Min nTPM: 193.2
RHH5234_R3606
234.4
RHH5206_R3577
193.2
RHH5263_R3635
336.1
RHH5298_R3664
244.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
