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ARHGEF1
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  • ARHGEF1
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ARHGEF1
Synonyms LBCL2, P115-RHOGEF, SUB1.5
Gene descriptioni

Full gene name according to HGNC.

Rho guanine nucleotide exchange factor 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 19
Cytoband q13.2
Chromosome location (bp) 41883173 - 41930150
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

12
Ensembl ENSG00000076928 (version 109)
Entrez gene 9138
HGNC HGNC:681
UniProt Q92888 (UniProt - Evidence at protein level)
neXtProt NX_Q92888
GeneCards ARHGEF1
Antibodypedia ARHGEF1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Seems to play a role in the regulation of RhoA GTPase by guanine nucleotide-binding alpha-12 (GNA12) and alpha-13 (GNA13) subunits 1, 2. Acts as GTPase-activating protein (GAP) for GNA12 and GNA13, and as guanine nucleotide exchange factor (GEF) for RhoA GTPase 3, 4, 5, 6. Activated G alpha 13/GNA13 stimulates the RhoGEF activity through interaction with the RGS-like domain 7. This GEF activity is inhibited by binding to activated GNA12 8. Mediates angiotensin-2-induced RhoA activation 9.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

GTPase activation, Guanine-nucleotide releasing factor
Gene summary (Entrez)i

Useful information about the gene from Entrez

Rho GTPases play a fundamental role in numerous cellular processes that are initiated by extracellular stimuli that work through G protein coupled receptors. The encoded protein may form complex with G proteins and stimulate Rho-dependent signals. Multiple alternatively spliced transcript variants have been found for this gene, but the full-length nature of some variants has not been defined. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ARHGEF1-201
ENSP00000337261
ENST00000337665
Q92888
[Direct mapping] Rho guanine nucleotide exchange factor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001664 [G protein-coupled receptor binding]
GO:0003723 [RNA binding]
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0007266 [Rho protein signal transduction]
GO:0016020 [membrane]
GO:0051056 [regulation of small GTPase mediated signal transduction]
Show all
927 aa
104.1 kDa
No 0
ARHGEF1-202
ENSP00000344429
ENST00000347545
Q92888
[Direct mapping] Rho guanine nucleotide exchange factor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001664 [G protein-coupled receptor binding]
GO:0003723 [RNA binding]
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0007266 [Rho protein signal transduction]
GO:0016020 [membrane]
GO:0051056 [regulation of small GTPase mediated signal transduction]
Show all
879 aa
98.8 kDa
No 0
ARHGEF1-203
ENSP00000346532
ENST00000354532
Q92888
[Direct mapping] Rho guanine nucleotide exchange factor 1
Show all
A0A024R0R1
[Target identity:100%; Query identity:100%] Rho guanine nucleotide exchange factor (GEF) 1, isoform CRA_e
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001664 [G protein-coupled receptor binding]
GO:0003723 [RNA binding]
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0007266 [Rho protein signal transduction]
GO:0016020 [membrane]
GO:0051056 [regulation of small GTPase mediated signal transduction]
Show all
912 aa
102.4 kDa
No 0
ARHGEF1-204
ENSP00000367394
ENST00000378152
Q92888
[Direct mapping] Rho guanine nucleotide exchange factor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001664 [G protein-coupled receptor binding]
GO:0003723 [RNA binding]
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0007266 [Rho protein signal transduction]
GO:0016020 [membrane]
GO:0051056 [regulation of small GTPase mediated signal transduction]
Show all
948 aa
105.9 kDa
No 0
ARHGEF1-207
ENSP00000470042
ENST00000594258
M0QYS3
[Direct mapping] Rho guanine nucleotide exchange factor 1
Show all
   MEMSAT3 predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   THUMBUP predicted membrane proteins
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
Show all
307 aa
34.2 kDa
No 0
ARHGEF1-208
ENSP00000471942
ENST00000594417
M0R1K8
[Direct mapping] Rho guanine nucleotide exchange factor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
128 aa
13.9 kDa
No 0
ARHGEF1-210
ENSP00000470557
ENST00000594521
M0QZH8
[Direct mapping] Rho guanine nucleotide exchange factor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
Show all
275 aa
30 kDa
No 0
ARHGEF1-211
ENSP00000472466
ENST00000595723
M0R2C7
[Direct mapping] Rho guanine nucleotide exchange factor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
Show all
291 aa
32.8 kDa
No 0
ARHGEF1-218
ENSP00000469735
ENST00000599589
M0QYC1
[Direct mapping] Rho guanine nucleotide exchange factor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0005737 [cytoplasm]
Show all
702 aa
78.5 kDa
No 0
ARHGEF1-219
ENSP00000470715
ENST00000599846
M0QZR4
[Direct mapping] Rho guanine nucleotide exchange factor 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001664 [G protein-coupled receptor binding]
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0005096 [GTPase activator activity]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0016020 [membrane]
Show all
968 aa
108.3 kDa
No 0
ARHGEF1-224
ENSP00000514042
ENST00000698932
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001664 [G protein-coupled receptor binding]
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0005096 [GTPase activator activity]
GO:0005737 [cytoplasm]
GO:0007186 [G protein-coupled receptor signaling pathway]
Show all
975 aa
109.5 kDa
No 0
ARHGEF1-227
ENSP00000516658
ENST00000706938
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001664 [G protein-coupled receptor binding]
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0005096 [GTPase activator activity]
GO:0005737 [cytoplasm]
GO:0007186 [G protein-coupled receptor signaling pathway]
Show all
972 aa
109 kDa
No 0

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