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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
30.3
nTPM
Monaco:
157.2
nTPM
Schmiedel:
378.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
30.3
HPA sample
nTPM
gdT-cell nTPM: 30.3
Samples: 6
Max nTPM: 41.8
Min nTPM: 19.5
P10809_1007
26.2
P10809_1022
29.0
P10809_1041
29.3
P10809_1060
41.8
P10809_1077
36.0
P10809_1098
19.5
MAIT T-cell nTPM: 24.9
Samples: 6
Max nTPM: 39.0
Min nTPM: 13.1
P10809_1006
13.1
P10809_1024
19.5
P10809_1043
25.4
P10809_1062
37.8
P10809_1083
39.0
P10809_1097
14.7
Memory CD4 T-cell nTPM: 25.9
Samples: 6
Max nTPM: 33.4
Min nTPM: 15.9
P10809_1014
15.9
P10809_1026
26.9
P10809_1045
28.1
P10809_1064
33.4
P10809_1086
31.1
P10809_1113
19.9
Memory CD8 T-cell nTPM: 25.9
Samples: 5
Max nTPM: 36.6
Min nTPM: 19.4
P10809_1012
19.4
P10809_1027
23.1
P10809_1046
29.2
P10809_1065
36.6
P10809_1111
21.3
Naive CD4 T-cell nTPM: 29.4
Samples: 6
Max nTPM: 38.0
Min nTPM: 19.0
P10809_1015
19.0
P10809_1030
30.0
P10809_1049
38.0
P10809_1068
33.8
P10809_1085
31.2
P10809_1112
24.5
Naive CD8 T-cell nTPM: 28.9
Samples: 6
Max nTPM: 38.0
Min nTPM: 22.9
P10809_1016
23.4
P10809_1031
38.0
P10809_1050
29.6
P10809_1069
29.6
P10809_1087
29.7
P10809_1110
22.9
T-reg nTPM: 27.3
Samples: 6
Max nTPM: 54.3
Min nTPM: 14.6
P10809_1018
14.6
P10809_1037
19.4
P10809_1056
22.0
P10809_1075
54.3
P10809_1094
30.4
P10809_1106
22.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
157.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 134.5
Samples: 4
Max nTPM: 172.2
Min nTPM: 102.2
RHH5202_R3573
172.2
RHH5230_R3602
131.2
RHH5259_R3631
102.2
RHH5288_R3660
132.3
Effector memory CD8 T-cell nTPM: 139.1
Samples: 4
Max nTPM: 155.6
Min nTPM: 129.6
RHH5203_R3574
137.2
RHH5231_R3603
133.8
RHH5260_R3632
129.6
RHH5289_R3661
155.6
MAIT T-cell nTPM: 117.5
Samples: 4
Max nTPM: 146.8
Min nTPM: 94.6
RHH5233_R3605
146.8
RHH5205_R3576
114.4
RHH5262_R3634
94.6
RHH5297_R3663
114.2
Memory CD4 T-cell TFH nTPM: 151.1
Samples: 4
Max nTPM: 161.1
Min nTPM: 130.1
RHH5300_R3666
130.1
RHH5236_R3608
152.8
RHH5265_R3637
161.1
RHH5208_R3579
160.3
Memory CD4 T-cell Th1 nTPM: 121.7
Samples: 4
Max nTPM: 133.3
Min nTPM: 111.5
RHH5210_R3581
133.3
RHH5302_R3668
123.4
RHH5238_R3610
111.5
RHH5267_R3639
118.4
Memory CD4 T-cell Th1/Th17 nTPM: 125.4
Samples: 4
Max nTPM: 131.7
Min nTPM: 118.5
RHH5303_R3669
131.7
RHH5211_R3582
129.8
RHH5239_R3611
118.5
RHH5268_R3640
121.7
Memory CD4 T-cell Th17 nTPM: 122.2
Samples: 4
Max nTPM: 149.6
Min nTPM: 103.8
RHH5304_R3670
120.2
RHH5212_R3583
115.2
RHH5240_R3612
149.6
RHH5269_R3641
103.8
Memory CD4 T-cell Th2 nTPM: 108.4
Samples: 4
Max nTPM: 134.7
Min nTPM: 87.3
RHH5305_R3671
106.0
RHH5213_R3584
87.3
RHH5241_R3613
134.7
RHH5270_R3642
105.6
Naive CD4 T-cell nTPM: 132.0
Samples: 4
Max nTPM: 143.0
Min nTPM: 124.2
RHH5306_R3672
124.2
RHH5214_R3585
143.0
RHH5242_R3614
135.6
RHH5271_R3643
125.2
Naive CD8 T-cell nTPM: 150.0
Samples: 4
Max nTPM: 171.9
Min nTPM: 125.6
RHH5201_R3572
171.9
RHH5229_R3601
125.6
RHH5258_R3630
158.9
RHH5287_R3659
143.6
Non-Vd2 gdTCR nTPM: 140.9
Samples: 4
Max nTPM: 143.8
Min nTPM: 135.2
RHH5235_R3607
143.8
RHH5264_R3636
141.9
RHH5207_R3578
135.2
RHH5299_R3665
142.6
T-reg nTPM: 134.6
Samples: 4
Max nTPM: 143.7
Min nTPM: 118.2
RHH5301_R3667
143.4
RHH5237_R3609
133.1
RHH5266_R3638
118.2
RHH5209_R3580
143.7
Terminal effector memory CD4 T-cell nTPM: 144.2
Samples: 2
Max nTPM: 155.4
Min nTPM: 133.0
RHH5243_R3615
155.4
RHH5272_R3644
133.0
Terminal effector memory CD8 T-cell nTPM: 157.2
Samples: 4
Max nTPM: 176.9
Min nTPM: 134.0
RHH5232_R3604
173.8
RHH5204_R3575
176.9
RHH5261_R3633
134.0
RHH5296_R3662
144.1
Vd2 gdTCR nTPM: 137.3
Samples: 4
Max nTPM: 169.4
Min nTPM: 119.7
RHH5234_R3606
124.6
RHH5206_R3577
169.4
RHH5263_R3635
119.7
RHH5298_R3664
135.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
