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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
25.5
nTPM
Monaco:
100.2
nTPM
Schmiedel:
54.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
25.5
HPA sample
nTPM
gdT-cell nTPM: 17.3
Samples: 6
Max nTPM: 23.2
Min nTPM: 10.7
P10809_1007
10.7
P10809_1022
20.1
P10809_1041
23.2
P10809_1060
15.3
P10809_1077
12.8
P10809_1098
21.4
MAIT T-cell nTPM: 21.2
Samples: 6
Max nTPM: 25.6
Min nTPM: 15.3
P10809_1006
22.7
P10809_1024
25.6
P10809_1043
23.9
P10809_1062
20.5
P10809_1083
18.9
P10809_1097
15.3
Memory CD4 T-cell nTPM: 18.4
Samples: 6
Max nTPM: 23.8
Min nTPM: 14.6
P10809_1014
15.9
P10809_1026
14.6
P10809_1045
23.3
P10809_1064
16.8
P10809_1086
15.9
P10809_1113
23.8
Memory CD8 T-cell nTPM: 19.2
Samples: 5
Max nTPM: 21.6
Min nTPM: 15.9
P10809_1012
18.2
P10809_1027
21.6
P10809_1046
18.9
P10809_1065
15.9
P10809_1111
21.2
Naive CD4 T-cell nTPM: 25.5
Samples: 6
Max nTPM: 36.8
Min nTPM: 16.0
P10809_1015
16.0
P10809_1030
36.8
P10809_1049
31.5
P10809_1068
28.6
P10809_1085
17.3
P10809_1112
23.0
Naive CD8 T-cell nTPM: 20.0
Samples: 6
Max nTPM: 26.0
Min nTPM: 14.6
P10809_1016
15.3
P10809_1031
26.0
P10809_1050
22.1
P10809_1069
21.6
P10809_1087
14.6
P10809_1110
20.4
T-reg nTPM: 14.6
Samples: 6
Max nTPM: 24.2
Min nTPM: 8.1
P10809_1018
8.1
P10809_1037
9.8
P10809_1056
18.4
P10809_1075
16.4
P10809_1094
10.9
P10809_1106
24.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
100.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 84.2
Samples: 4
Max nTPM: 115.6
Min nTPM: 55.0
RHH5202_R3573
92.8
RHH5230_R3602
73.4
RHH5259_R3631
115.6
RHH5288_R3660
55.0
Effector memory CD8 T-cell nTPM: 74.0
Samples: 4
Max nTPM: 78.3
Min nTPM: 69.1
RHH5203_R3574
72.1
RHH5231_R3603
69.1
RHH5260_R3632
78.3
RHH5289_R3661
76.4
MAIT T-cell nTPM: 82.2
Samples: 4
Max nTPM: 102.6
Min nTPM: 72.2
RHH5233_R3605
73.9
RHH5205_R3576
102.6
RHH5262_R3634
79.9
RHH5297_R3663
72.2
Memory CD4 T-cell TFH nTPM: 75.3
Samples: 4
Max nTPM: 84.3
Min nTPM: 59.7
RHH5300_R3666
74.4
RHH5236_R3608
84.3
RHH5265_R3637
82.9
RHH5208_R3579
59.7
Memory CD4 T-cell Th1 nTPM: 90.2
Samples: 4
Max nTPM: 104.5
Min nTPM: 68.9
RHH5210_R3581
104.5
RHH5302_R3668
68.9
RHH5238_R3610
101.4
RHH5267_R3639
86.0
Memory CD4 T-cell Th1/Th17 nTPM: 100.2
Samples: 4
Max nTPM: 121.4
Min nTPM: 84.8
RHH5303_R3669
84.9
RHH5211_R3582
109.7
RHH5239_R3611
121.4
RHH5268_R3640
84.8
Memory CD4 T-cell Th17 nTPM: 86.2
Samples: 4
Max nTPM: 100.2
Min nTPM: 69.0
RHH5304_R3670
77.8
RHH5212_R3583
97.9
RHH5240_R3612
100.2
RHH5269_R3641
69.0
Memory CD4 T-cell Th2 nTPM: 83.9
Samples: 4
Max nTPM: 96.0
Min nTPM: 69.3
RHH5305_R3671
69.3
RHH5213_R3584
90.2
RHH5241_R3613
80.2
RHH5270_R3642
96.0
Naive CD4 T-cell nTPM: 88.5
Samples: 4
Max nTPM: 97.7
Min nTPM: 76.8
RHH5306_R3672
82.1
RHH5214_R3585
97.5
RHH5242_R3614
97.7
RHH5271_R3643
76.8
Naive CD8 T-cell nTPM: 86.1
Samples: 4
Max nTPM: 109.1
Min nTPM: 52.2
RHH5201_R3572
52.2
RHH5229_R3601
109.1
RHH5258_R3630
82.9
RHH5287_R3659
100.3
Non-Vd2 gdTCR nTPM: 79.4
Samples: 4
Max nTPM: 88.0
Min nTPM: 67.1
RHH5235_R3607
88.0
RHH5264_R3636
81.9
RHH5207_R3578
80.5
RHH5299_R3665
67.1
T-reg nTPM: 85.8
Samples: 4
Max nTPM: 111.0
Min nTPM: 59.7
RHH5301_R3667
59.7
RHH5237_R3609
92.8
RHH5266_R3638
79.8
RHH5209_R3580
111.0
Terminal effector memory CD4 T-cell nTPM: 76.4
Samples: 2
Max nTPM: 88.3
Min nTPM: 64.4
RHH5243_R3615
88.3
RHH5272_R3644
64.4
Terminal effector memory CD8 T-cell nTPM: 75.9
Samples: 4
Max nTPM: 90.1
Min nTPM: 59.8
RHH5232_R3604
77.3
RHH5204_R3575
59.8
RHH5261_R3633
90.1
RHH5296_R3662
76.4
Vd2 gdTCR nTPM: 79.0
Samples: 4
Max nTPM: 87.2
Min nTPM: 69.2
RHH5234_R3606
77.3
RHH5206_R3577
69.2
RHH5263_R3635
87.2
RHH5298_R3664
82.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
