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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
35.5
nTPM
HPA Brain:
27.5
nTPM
GTEx:
35.5
nTPM
FANTOM5:
74.2
Scaled Tags Per Million
Pig:
26.9
nTPM
Mouse:
55.1
nTPM
Allen mouse:
4.1
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max nTPM
27.5
Sample id
Sample description
nTPM
Amygdala nTPM: 27.5
2814
Male, age 76, right hemisphere
33.4
2514
Male, age 75, right hemisphere
32.7
2695
Female, age 67, right hemisphere
27.6
1987
Female, age 91, left hemisphere
25.0
2517
Female, age 94, left hemisphere
18.8
Basal amygdala nTPM: 23.3
1955
Male, age 76, both hemispheres
29.2
2243
Female, age 91, right hemisphere
26.3
2609
Male, age 75, right hemisphere
25.8
2110
Male, age 80, left hemisphere
23.6
2685
Female, age 94, left hemisphere
20.8
2827
Female, age 67, right hemisphere
14.1
Central amygdala nTPM: 23.7
1905
Male, age 76, both hemispheres
33.1
2515
Male, age 75, right hemisphere
26.9
2239
Male, age 80, left hemisphere
21.9
2701
Female, age 91, right hemisphere
20.0
2826
Female, age 94, left hemisphere
16.7
Corticomedial amygdala nTPM: 25.0
2240
Male, age 76, both hemispheres
30.5
2829
Male, age 80, left hemisphere
29.7
2428
Male, age 75, right hemisphere
27.0
2242
Female, age 91, right hemisphere
26.8
2429
Female, age 94, left hemisphere
21.9
2535
Female, age 67, right hemisphere
14.3
Lateral amygdala nTPM: 21.5
1883
Male, age 76, both hemispheres
27.9
2516
Male, age 75, right hemisphere
26.7
2256
Male, age 80, left hemisphere
22.2
2534
Female, age 94, left hemisphere
18.8
2255
Female, age 91, right hemisphere
17.8
2830
Female, age 67, right hemisphere
15.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
35.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 35.5
Samples: 152
Max nTPM: 65.7
Min nTPM: 24.8
Std nTPM: 6.8
Median nTPM: 34.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
65.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
61.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
60.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
56.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
54.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
52.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
51.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
49.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
47.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
47.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
46.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
46.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
44.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
44.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
44.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
43.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
43.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
42.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
42.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
41.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
41.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
41.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
41.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
40.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
39.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
39.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
39.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
38.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
38.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
38.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
38.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
38.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
38.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
38.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
37.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
37.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
37.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
37.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
37.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
37.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
37.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
37.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
36.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
36.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
36.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
36.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
36.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
36.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
36.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
36.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
36.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
36.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
35.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
35.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
35.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
35.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
35.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
35.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
35.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
35.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
35.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
35.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
35.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
35.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
35.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
35.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
35.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
35.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
35.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
35.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
35.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
35.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
35.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
34.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
34.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
34.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
34.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
34.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
34.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
34.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
34.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
34.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
34.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
33.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
33.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
33.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
33.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
33.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
33.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
33.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
33.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
33.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
33.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
33.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
32.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
32.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
32.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
32.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
32.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
32.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
32.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
32.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
32.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
32.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
32.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
32.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
31.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
31.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
31.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
31.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
31.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
31.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
31.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
31.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
31.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
31.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
30.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
30.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
30.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
30.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
30.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
30.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
30.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
30.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
30.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
30.0
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
29.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
29.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
29.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
29.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
29.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
29.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
29.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
29.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
28.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
28.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
28.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
28.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
28.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
28.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
27.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
27.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
27.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
27.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
27.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
27.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
27.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
26.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
26.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
26.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
25.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
24.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
55.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 55.1
Samples: 4
Max nTPM: 59.7
Min nTPM: 52.6
Sample A
Male
52.6
Sample B
Male
59.7
Sample C
Female
52.9
Sample D
Female
55.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
