HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:31.7 nTPM
HPA Brain:26.3 nTPM
GTEx:31.7 nTPM
FANTOM5:69.1 Scaled Tags Per Million
Pig:40.4 nTPM
Mouse:65.9 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.3
Sample id Sample description nTPM
Hippocampus
nTPM: 26.0
1855 Male, age 76, left hemisphere 30.3
1898 Male, age 80, left hemisphere 29.3
2621 Female, age 67, right hemisphere 27.8
1911 Female, age 85, right hemisphere 25.2
2529 Female, age 94, left hemisphere 24.1
2148 Female, age 91, left hemisphere 19.6
Dentate gyrus
nTPM: 23.6
2010 Male, age 76, both hemispheres 28.9
2246 Female, age 85, both hemispheres 27.2
2528 Male, age 74, both hemispheres 24.0
2530 Female, age 94, left hemisphere 22.8
1927 Female, age 91, both hemispheres 22.2
2531 Female, age 67, both hemispheres 16.8
Entorhinal gyrus
nTPM: 21.6
1938 Female, age 85, left hemisphere 25.8
2117 Female, age 91, right hemisphere 25.4
2764 Male, age 80, right hemisphere 22.3
1787 Male, age 76, left hemisphere 20.8
2613 Female, age 94, left hemisphere 18.8
2686 Male, age 75, right hemisphere 16.3
Hippocampus, CA1
nTPM: 26.3
2749 Male, age 80, left hemisphere 32.5
2045 Male, age 76, both hemispheres 28.0
2527 Male, age 74, both hemispheres 26.8
1873 Female, age 85, both hemispheres 23.9
2082 Female, age 91, right hemisphere 20.3
Hippocampus, CA2
nTPM: 23.7
2249 Male, age 74, both hemispheres 29.2
1892 Male, age 76, both hemispheres 25.9
1963 Male, age 80, left hemisphere 24.3
2437 Female, age 94, left hemisphere 22.6
1940 Female, age 85, left hemisphere 21.4
2113 Female, age 91, right hemisphere 19.1
Hippocampus, CA3
nTPM: 23.6
2137 Male, age 80, left hemisphere 29.1
2436 Male, age 74, both hemispheres 27.1
1867 Male, age 76, both hemispheres 26.4
1891 Female, age 85, both hemispheres 21.8
2620 Female, age 94, left hemisphere 21.5
2861 Female, age 67, both hemispheres 15.8
Parahippocampal cortex
nTPM: 23.7
2245 Female, age 91, both hemispheres 26.4
1850 Male, age 80, both hemispheres 26.1
2018 Male, age 76, both hemispheres 25.7
2250 Female, age 67, right hemisphere 25.7
1933 Female, age 85, both hemispheres 25.4
2692 Male, age 74, both hemispheres 22.9
2693 Female, age 94, both hemispheres 22.4
1990 Female, age 91, right hemisphere 21.7
2532 Female, age 72, left hemisphere 21.2
2622 Female, age 67, right hemisphere 19.8
Perirhinal gyrus
nTPM: 25.5
1847 Female, age 91, left hemisphere 27.5
1794 Male, age 80, right hemisphere 27.2
2521 Female, age 94, right hemisphere 26.2
1841 Female, age 85, right hemisphere 25.6
2848 Male, age 76, right hemisphere 20.8
Subiculum
nTPM: 24.8
2042 Male, age 76, both hemispheres 31.6
1901 Male, age 80, both hemispheres 27.1
2619 Male, age 74, both hemispheres 23.5
1977 Female, age 85, both hemispheres 22.9
2729 Female, age 91, right hemisphere 22.9
2438 Female, age 94, left hemisphere 21.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.7
Samples: 197

Max nTPM: 54.6
Min nTPM: 20.9
Std nTPM: 5.2
Median nTPM: 30.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 54.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 47.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 46.2
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 45.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 44.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 43.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 42.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 42.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 42.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 42.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 41.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.1
FF:10169-103B7 60 years, female 71.6
FF:10153-102I9 76 years, female 66.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.4
Pig sample Sample description nTPM
Subiculum
nTPM: 33.2
Samples: 4

Max nTPM: 41.7
Min nTPM: 29.6
Sample A Female 41.7
Sample B Female 30.2
Sample C Male 29.6
Sample D Male 31.4
Dorsal hippocampus
nTPM: 40.4
Samples: 4

Max nTPM: 51.2
Min nTPM: 33.6
Sample A Female 51.2
Sample B Female 39.5
Sample C Male 37.3
Sample D Male 33.6
Entorhinal cortex
nTPM: 33.1
Samples: 4

Max nTPM: 38.1
Min nTPM: 27.7
Sample A Female 34.9
Sample B Female 38.1
Sample C Male 31.8
Sample D Male 27.7
Ventral hippocampus
nTPM: 32.9
Samples: 4

Max nTPM: 38.7
Min nTPM: 26.1
Sample A Female 34.8
Sample B Female 26.1
Sample C Male 32.1
Sample D Male 38.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.2
Samples: 4

Max nTPM: 59.3
Min nTPM: 52.6
Sample A Male 52.6
Sample B Male 54.2
Sample C Female 58.8
Sample D Female 59.3
Hippocampal formation
nTPM: 65.9
Samples: 4

Max nTPM: 78.8
Min nTPM: 59.6
Sample A Male 78.8
Sample B Male 59.6
Sample C Female 64.7
Sample D Female 60.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
68563019 Antisense, RP_050120_02_H12, Mouse strain C57BL/6J (56 days, male) 3.0

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