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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
56.1
nTPM
Monaco:
114.5
nTPM
Schmiedel:
56.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
56.1
HPA sample
nTPM
gdT-cell nTPM: 42.7
Samples: 6
Max nTPM: 54.8
Min nTPM: 36.0
P10809_1007
40.4
P10809_1022
41.9
P10809_1041
36.0
P10809_1060
43.8
P10809_1077
54.8
P10809_1098
39.4
MAIT T-cell nTPM: 34.7
Samples: 6
Max nTPM: 46.5
Min nTPM: 28.5
P10809_1006
31.0
P10809_1024
28.5
P10809_1043
28.9
P10809_1062
36.4
P10809_1083
46.5
P10809_1097
36.6
Memory CD4 T-cell nTPM: 37.5
Samples: 6
Max nTPM: 44.2
Min nTPM: 29.9
P10809_1014
32.1
P10809_1026
42.7
P10809_1045
29.9
P10809_1064
44.2
P10809_1086
39.7
P10809_1113
36.5
Memory CD8 T-cell nTPM: 38.1
Samples: 5
Max nTPM: 45.1
Min nTPM: 33.5
P10809_1012
35.3
P10809_1027
37.4
P10809_1046
33.5
P10809_1065
45.1
P10809_1111
39.3
Naive CD4 T-cell nTPM: 23.4
Samples: 6
Max nTPM: 32.4
Min nTPM: 18.8
P10809_1015
21.5
P10809_1030
22.8
P10809_1049
18.8
P10809_1068
24.0
P10809_1085
32.4
P10809_1112
20.6
Naive CD8 T-cell nTPM: 33.5
Samples: 6
Max nTPM: 50.5
Min nTPM: 24.2
P10809_1016
24.6
P10809_1031
31.6
P10809_1050
24.2
P10809_1069
50.5
P10809_1087
45.4
P10809_1110
24.7
T-reg nTPM: 56.1
Samples: 6
Max nTPM: 65.6
Min nTPM: 47.5
P10809_1018
58.3
P10809_1037
50.6
P10809_1056
53.1
P10809_1075
61.3
P10809_1094
65.6
P10809_1106
47.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
114.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 64.0
Samples: 4
Max nTPM: 74.0
Min nTPM: 38.5
RHH5202_R3573
72.4
RHH5230_R3602
74.0
RHH5259_R3631
38.5
RHH5288_R3660
70.9
Effector memory CD8 T-cell nTPM: 114.5
Samples: 4
Max nTPM: 156.8
Min nTPM: 90.6
RHH5203_R3574
156.8
RHH5231_R3603
90.6
RHH5260_R3632
93.4
RHH5289_R3661
117.3
MAIT T-cell nTPM: 62.0
Samples: 4
Max nTPM: 72.2
Min nTPM: 52.0
RHH5233_R3605
62.5
RHH5205_R3576
72.2
RHH5262_R3634
61.1
RHH5297_R3663
52.0
Memory CD4 T-cell TFH nTPM: 54.1
Samples: 4
Max nTPM: 64.1
Min nTPM: 39.6
RHH5300_R3666
39.6
RHH5236_R3608
51.2
RHH5265_R3637
64.1
RHH5208_R3579
61.4
Memory CD4 T-cell Th1 nTPM: 48.0
Samples: 4
Max nTPM: 64.9
Min nTPM: 20.7
RHH5210_R3581
42.6
RHH5302_R3668
63.6
RHH5238_R3610
20.7
RHH5267_R3639
64.9
Memory CD4 T-cell Th1/Th17 nTPM: 59.3
Samples: 4
Max nTPM: 83.2
Min nTPM: 22.3
RHH5303_R3669
72.5
RHH5211_R3582
83.2
RHH5239_R3611
22.3
RHH5268_R3640
59.3
Memory CD4 T-cell Th17 nTPM: 61.7
Samples: 4
Max nTPM: 81.0
Min nTPM: 51.3
RHH5304_R3670
57.9
RHH5212_R3583
81.0
RHH5240_R3612
56.6
RHH5269_R3641
51.3
Memory CD4 T-cell Th2 nTPM: 56.1
Samples: 4
Max nTPM: 68.7
Min nTPM: 40.1
RHH5305_R3671
40.1
RHH5213_R3584
62.4
RHH5241_R3613
53.0
RHH5270_R3642
68.7
Naive CD4 T-cell nTPM: 35.1
Samples: 4
Max nTPM: 50.7
Min nTPM: 26.7
RHH5306_R3672
27.7
RHH5214_R3585
26.7
RHH5242_R3614
35.1
RHH5271_R3643
50.7
Naive CD8 T-cell nTPM: 26.2
Samples: 4
Max nTPM: 45.5
Min nTPM: 12.9
RHH5201_R3572
45.5
RHH5229_R3601
12.9
RHH5258_R3630
26.9
RHH5287_R3659
19.3
Non-Vd2 gdTCR nTPM: 107.7
Samples: 4
Max nTPM: 175.8
Min nTPM: 68.3
RHH5235_R3607
102.6
RHH5264_R3636
83.9
RHH5207_R3578
175.8
RHH5299_R3665
68.3
T-reg nTPM: 50.1
Samples: 4
Max nTPM: 83.3
Min nTPM: 34.8
RHH5301_R3667
34.8
RHH5237_R3609
46.5
RHH5266_R3638
83.3
RHH5209_R3580
35.7
Terminal effector memory CD4 T-cell nTPM: 86.1
Samples: 2
Max nTPM: 94.0
Min nTPM: 78.2
RHH5243_R3615
78.2
RHH5272_R3644
94.0
Terminal effector memory CD8 T-cell nTPM: 93.3
Samples: 4
Max nTPM: 104.3
Min nTPM: 81.5
RHH5232_R3604
104.3
RHH5204_R3575
81.5
RHH5261_R3633
103.4
RHH5296_R3662
83.9
Vd2 gdTCR nTPM: 73.7
Samples: 4
Max nTPM: 106.1
Min nTPM: 44.5
RHH5234_R3606
58.5
RHH5206_R3577
106.1
RHH5263_R3635
85.5
RHH5298_R3664
44.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
