HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:22.9 nTPM
HPA Brain:63.6 nTPM
GTEx:22.9 nTPM
FANTOM5:64.0 Scaled Tags Per Million
Pig:41.1 nTPM
Mouse:52.0 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056402Antibody CAB033614
Glial cells Not detectedMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 63.6
Sample id Sample description nTPM
Hippocampus
nTPM: 60.5
1898 Male, age 80, left hemisphere 97.6
1855 Male, age 76, left hemisphere 72.8
2621 Female, age 67, right hemisphere 62.4
2148 Female, age 91, left hemisphere 60.3
2529 Female, age 94, left hemisphere 42.2
1911 Female, age 85, right hemisphere 27.8
Dentate gyrus
nTPM: 57.3
2010 Male, age 76, both hemispheres 95.2
2530 Female, age 94, left hemisphere 71.4
1927 Female, age 91, both hemispheres 56.3
2528 Male, age 74, both hemispheres 44.9
2246 Female, age 85, both hemispheres 43.3
2531 Female, age 67, both hemispheres 32.6
Entorhinal gyrus
nTPM: 45.1
2117 Female, age 91, right hemisphere 50.6
2764 Male, age 80, right hemisphere 48.4
2686 Male, age 75, right hemisphere 44.6
1938 Female, age 85, left hemisphere 43.2
2613 Female, age 94, left hemisphere 42.3
1787 Male, age 76, left hemisphere 41.5
Hippocampus, CA1
nTPM: 63.6
2749 Male, age 80, left hemisphere 107.0
1873 Female, age 85, both hemispheres 76.9
2045 Male, age 76, both hemispheres 51.4
2527 Male, age 74, both hemispheres 47.6
2082 Female, age 91, right hemisphere 35.2
Hippocampus, CA2
nTPM: 54.7
1963 Male, age 80, left hemisphere 123.3
1892 Male, age 76, both hemispheres 56.7
2249 Male, age 74, both hemispheres 47.8
2437 Female, age 94, left hemisphere 41.2
1940 Female, age 85, left hemisphere 29.8
2113 Female, age 91, right hemisphere 29.8
Hippocampus, CA3
nTPM: 40.1
2861 Female, age 67, both hemispheres 59.7
2436 Male, age 74, both hemispheres 56.3
1867 Male, age 76, both hemispheres 45.1
2620 Female, age 94, left hemisphere 30.3
1891 Female, age 85, both hemispheres 29.6
2137 Male, age 80, left hemisphere 19.9
Parahippocampal cortex
nTPM: 36.3
2018 Male, age 76, both hemispheres 44.5
1933 Female, age 85, both hemispheres 39.6
2250 Female, age 67, right hemisphere 39.0
1990 Female, age 91, right hemisphere 37.9
2622 Female, age 67, right hemisphere 37.3
2693 Female, age 94, both hemispheres 36.3
2692 Male, age 74, both hemispheres 36.1
1850 Male, age 80, both hemispheres 33.4
2245 Female, age 91, both hemispheres 29.8
2532 Female, age 72, left hemisphere 29.3
Perirhinal gyrus
nTPM: 34.4
1847 Female, age 91, left hemisphere 43.8
2848 Male, age 76, right hemisphere 36.9
1794 Male, age 80, right hemisphere 32.9
2521 Female, age 94, right hemisphere 31.5
1841 Female, age 85, right hemisphere 27.0
Subiculum
nTPM: 41.2
2438 Female, age 94, left hemisphere 49.6
2729 Female, age 91, right hemisphere 44.0
1977 Female, age 85, both hemispheres 41.8
2042 Male, age 76, both hemispheres 41.1
2619 Male, age 74, both hemispheres 37.1
1901 Male, age 80, both hemispheres 33.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.9
Samples: 197

Max nTPM: 71.6
Min nTPM: 7.9
Std nTPM: 11.1
Median nTPM: 19.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 71.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 70.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 58.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 55.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 54.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 52.9
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 51.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 51.1
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 49.3
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 47.2
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 45.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.0
FF:10169-103B7 60 years, female 68.5
FF:10153-102I9 76 years, female 59.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.1
Pig sample Sample description nTPM
Subiculum
nTPM: 30.2
Samples: 4

Max nTPM: 32.2
Min nTPM: 27.4
Sample A Female 32.2
Sample B Female 27.4
Sample C Male 31.5
Sample D Male 29.7
Dorsal hippocampus
nTPM: 41.1
Samples: 4

Max nTPM: 52.5
Min nTPM: 30.0
Sample A Female 40.1
Sample B Female 41.9
Sample C Male 30.0
Sample D Male 52.5
Entorhinal cortex
nTPM: 20.5
Samples: 4

Max nTPM: 25.2
Min nTPM: 15.7
Sample A Female 25.2
Sample B Female 19.0
Sample C Male 22.2
Sample D Male 15.7
Ventral hippocampus
nTPM: 36.2
Samples: 4

Max nTPM: 45.7
Min nTPM: 30.3
Sample A Female 37.2
Sample B Female 30.3
Sample C Male 45.7
Sample D Male 31.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.0
Samples: 4

Max nTPM: 30.7
Min nTPM: 21.0
Sample A Male 28.9
Sample B Male 21.0
Sample C Female 30.7
Sample D Female 27.5
Hippocampal formation
nTPM: 52.0
Samples: 4

Max nTPM: 67.1
Min nTPM: 37.4
Sample A Male 37.4
Sample B Male 52.7
Sample C Female 67.1
Sample D Female 50.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
79588290 Antisense, RP_071204_02_E01, Mouse strain C57BL/6J (56 days, male) 5.4
79750677 Antisense, RP_071204_02_E01, Mouse strain C57BL/6J (56 days, male) 4.5
441 Antisense, RP_Baylor_102779, Mouse strain C57BL/6J (56 days, male) 3.4
440 Antisense, RP_Baylor_102779, Mouse strain C57BL/6J (56 days, male) 2.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org