We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1290.1
nTPM
Monaco:
1589.1
nTPM
Schmiedel:
227.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1290.1
HPA sample
nTPM
gdT-cell nTPM: 1290.1
Samples: 6
Max nTPM: 1549.3
Min nTPM: 960.7
P10809_1007
1166.5
P10809_1022
1549.3
P10809_1041
1541.2
P10809_1060
960.7
P10809_1077
1226.9
P10809_1098
1295.8
MAIT T-cell nTPM: 721.6
Samples: 6
Max nTPM: 930.6
Min nTPM: 604.6
P10809_1006
604.6
P10809_1024
832.1
P10809_1043
730.6
P10809_1062
625.6
P10809_1083
606.3
P10809_1097
930.6
Memory CD4 T-cell nTPM: 187.5
Samples: 6
Max nTPM: 390.3
Min nTPM: 48.4
P10809_1014
71.4
P10809_1026
109.1
P10809_1045
128.5
P10809_1064
377.0
P10809_1086
390.3
P10809_1113
48.4
Memory CD8 T-cell nTPM: 904.9
Samples: 5
Max nTPM: 1195.5
Min nTPM: 688.7
P10809_1012
688.7
P10809_1027
1195.5
P10809_1046
914.7
P10809_1065
908.0
P10809_1111
817.7
Naive CD4 T-cell nTPM: 38.9
Samples: 6
Max nTPM: 177.6
Min nTPM: 3.0
P10809_1015
10.3
P10809_1030
3.3
P10809_1049
9.1
P10809_1068
29.8
P10809_1085
177.6
P10809_1112
3.0
Naive CD8 T-cell nTPM: 532.8
Samples: 6
Max nTPM: 1027.3
Min nTPM: 98.5
P10809_1016
98.5
P10809_1031
444.4
P10809_1050
559.7
P10809_1069
833.3
P10809_1087
1027.3
P10809_1110
233.4
T-reg nTPM: 123.3
Samples: 6
Max nTPM: 190.4
Min nTPM: 41.6
P10809_1018
104.5
P10809_1037
149.8
P10809_1056
190.4
P10809_1075
153.6
P10809_1094
41.6
P10809_1106
100.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1589.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 264.1
Samples: 4
Max nTPM: 336.4
Min nTPM: 220.5
RHH5202_R3573
220.5
RHH5230_R3602
243.8
RHH5259_R3631
255.7
RHH5288_R3660
336.4
Effector memory CD8 T-cell nTPM: 703.0
Samples: 4
Max nTPM: 870.2
Min nTPM: 552.7
RHH5203_R3574
740.6
RHH5231_R3603
870.2
RHH5260_R3632
648.6
RHH5289_R3661
552.7
MAIT T-cell nTPM: 662.1
Samples: 4
Max nTPM: 894.8
Min nTPM: 427.9
RHH5233_R3605
684.8
RHH5205_R3576
427.9
RHH5262_R3634
640.7
RHH5297_R3663
894.8
Memory CD4 T-cell TFH nTPM: 59.2
Samples: 4
Max nTPM: 90.0
Min nTPM: 39.8
RHH5300_R3666
40.8
RHH5236_R3608
90.0
RHH5265_R3637
39.8
RHH5208_R3579
66.0
Memory CD4 T-cell Th1 nTPM: 131.6
Samples: 4
Max nTPM: 164.3
Min nTPM: 100.8
RHH5210_R3581
100.8
RHH5302_R3668
164.3
RHH5238_R3610
150.0
RHH5267_R3639
111.3
Memory CD4 T-cell Th1/Th17 nTPM: 140.2
Samples: 4
Max nTPM: 222.1
Min nTPM: 72.9
RHH5303_R3669
222.1
RHH5211_R3582
153.0
RHH5239_R3611
72.9
RHH5268_R3640
112.6
Memory CD4 T-cell Th17 nTPM: 60.2
Samples: 4
Max nTPM: 102.4
Min nTPM: 24.6
RHH5304_R3670
102.4
RHH5212_R3583
76.9
RHH5240_R3612
24.6
RHH5269_R3641
36.9
Memory CD4 T-cell Th2 nTPM: 55.5
Samples: 4
Max nTPM: 81.3
Min nTPM: 35.7
RHH5305_R3671
57.9
RHH5213_R3584
47.1
RHH5241_R3613
81.3
RHH5270_R3642
35.7
Naive CD4 T-cell nTPM: 23.8
Samples: 4
Max nTPM: 41.6
Min nTPM: 7.5
RHH5306_R3672
23.7
RHH5214_R3585
41.6
RHH5242_R3614
22.5
RHH5271_R3643
7.5
Naive CD8 T-cell nTPM: 4.8
Samples: 4
Max nTPM: 10.9
Min nTPM: 0.2
RHH5201_R3572
3.5
RHH5229_R3601
10.9
RHH5258_R3630
4.5
RHH5287_R3659
0.2
Non-Vd2 gdTCR nTPM: 1394.0
Samples: 4
Max nTPM: 1957.6
Min nTPM: 855.9
RHH5235_R3607
855.9
RHH5264_R3636
1361.5
RHH5207_R3578
1400.9
RHH5299_R3665
1957.6
T-reg nTPM: 48.3
Samples: 4
Max nTPM: 75.5
Min nTPM: 22.3
RHH5301_R3667
75.5
RHH5237_R3609
45.6
RHH5266_R3638
22.3
RHH5209_R3580
49.9
Terminal effector memory CD4 T-cell nTPM: 624.3
Samples: 2
Max nTPM: 761.3
Min nTPM: 487.3
RHH5243_R3615
487.3
RHH5272_R3644
761.3
Terminal effector memory CD8 T-cell nTPM: 1589.1
Samples: 4
Max nTPM: 2949.1
Min nTPM: 891.7
RHH5232_R3604
1103.1
RHH5204_R3575
2949.1
RHH5261_R3633
891.7
RHH5296_R3662
1412.4
Vd2 gdTCR nTPM: 1313.4
Samples: 4
Max nTPM: 2241.1
Min nTPM: 687.1
RHH5234_R3606
761.1
RHH5206_R3577
2241.1
RHH5263_R3635
687.1
RHH5298_R3664
1564.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
