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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
44.2
nTPM
Monaco:
127.0
nTPM
Schmiedel:
151.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
44.2
HPA sample
nTPM
gdT-cell nTPM: 44.2
Samples: 6
Max nTPM: 59.5
Min nTPM: 37.2
P10809_1007
40.4
P10809_1022
46.7
P10809_1041
59.5
P10809_1060
39.1
P10809_1077
37.2
P10809_1098
42.5
MAIT T-cell nTPM: 40.4
Samples: 6
Max nTPM: 43.7
Min nTPM: 32.5
P10809_1006
43.5
P10809_1024
38.5
P10809_1043
43.7
P10809_1062
43.6
P10809_1083
40.6
P10809_1097
32.5
Memory CD4 T-cell nTPM: 38.5
Samples: 6
Max nTPM: 41.9
Min nTPM: 34.8
P10809_1014
40.0
P10809_1026
41.3
P10809_1045
41.9
P10809_1064
34.9
P10809_1086
34.8
P10809_1113
38.0
Memory CD8 T-cell nTPM: 40.9
Samples: 5
Max nTPM: 49.5
Min nTPM: 34.0
P10809_1012
42.1
P10809_1027
34.0
P10809_1046
49.5
P10809_1065
35.6
P10809_1111
43.3
Naive CD4 T-cell nTPM: 33.6
Samples: 6
Max nTPM: 37.5
Min nTPM: 28.5
P10809_1015
32.3
P10809_1030
34.4
P10809_1049
35.9
P10809_1068
33.1
P10809_1085
28.5
P10809_1112
37.5
Naive CD8 T-cell nTPM: 40.7
Samples: 6
Max nTPM: 55.0
Min nTPM: 35.3
P10809_1016
36.4
P10809_1031
55.0
P10809_1050
39.9
P10809_1069
41.5
P10809_1087
35.3
P10809_1110
35.9
T-reg nTPM: 41.7
Samples: 6
Max nTPM: 53.9
Min nTPM: 31.5
P10809_1018
50.6
P10809_1037
44.8
P10809_1056
36.6
P10809_1075
31.5
P10809_1094
53.9
P10809_1106
32.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
127.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 98.7
Samples: 4
Max nTPM: 127.8
Min nTPM: 82.9
RHH5202_R3573
127.8
RHH5230_R3602
91.3
RHH5259_R3631
92.6
RHH5288_R3660
82.9
Effector memory CD8 T-cell nTPM: 127.0
Samples: 4
Max nTPM: 131.8
Min nTPM: 121.7
RHH5203_R3574
121.7
RHH5231_R3603
124.7
RHH5260_R3632
131.8
RHH5289_R3661
129.6
MAIT T-cell nTPM: 102.0
Samples: 4
Max nTPM: 117.0
Min nTPM: 80.1
RHH5233_R3605
107.2
RHH5205_R3576
117.0
RHH5262_R3634
103.6
RHH5297_R3663
80.1
Memory CD4 T-cell TFH nTPM: 105.7
Samples: 4
Max nTPM: 128.3
Min nTPM: 96.8
RHH5300_R3666
97.5
RHH5236_R3608
96.8
RHH5265_R3637
100.2
RHH5208_R3579
128.3
Memory CD4 T-cell Th1 nTPM: 103.2
Samples: 4
Max nTPM: 105.4
Min nTPM: 99.7
RHH5210_R3581
104.2
RHH5302_R3668
99.7
RHH5238_R3610
105.4
RHH5267_R3639
103.6
Memory CD4 T-cell Th1/Th17 nTPM: 118.9
Samples: 4
Max nTPM: 128.0
Min nTPM: 107.6
RHH5303_R3669
128.0
RHH5211_R3582
113.1
RHH5239_R3611
126.7
RHH5268_R3640
107.6
Memory CD4 T-cell Th17 nTPM: 117.5
Samples: 4
Max nTPM: 136.9
Min nTPM: 105.1
RHH5304_R3670
116.4
RHH5212_R3583
105.1
RHH5240_R3612
136.9
RHH5269_R3641
111.7
Memory CD4 T-cell Th2 nTPM: 107.8
Samples: 4
Max nTPM: 125.8
Min nTPM: 89.3
RHH5305_R3671
114.3
RHH5213_R3584
125.8
RHH5241_R3613
101.9
RHH5270_R3642
89.3
Naive CD4 T-cell nTPM: 95.2
Samples: 4
Max nTPM: 107.1
Min nTPM: 82.7
RHH5306_R3672
107.1
RHH5214_R3585
82.7
RHH5242_R3614
96.0
RHH5271_R3643
95.1
Naive CD8 T-cell nTPM: 101.4
Samples: 4
Max nTPM: 115.0
Min nTPM: 93.0
RHH5201_R3572
103.6
RHH5229_R3601
93.0
RHH5258_R3630
93.9
RHH5287_R3659
115.0
Non-Vd2 gdTCR nTPM: 110.7
Samples: 4
Max nTPM: 112.7
Min nTPM: 105.5
RHH5235_R3607
112.7
RHH5264_R3636
105.5
RHH5207_R3578
112.4
RHH5299_R3665
112.1
T-reg nTPM: 90.0
Samples: 4
Max nTPM: 96.5
Min nTPM: 82.1
RHH5301_R3667
82.1
RHH5237_R3609
85.0
RHH5266_R3638
96.4
RHH5209_R3580
96.5
Terminal effector memory CD4 T-cell nTPM: 115.1
Samples: 2
Max nTPM: 123.1
Min nTPM: 107.0
RHH5243_R3615
123.1
RHH5272_R3644
107.0
Terminal effector memory CD8 T-cell nTPM: 120.2
Samples: 4
Max nTPM: 145.8
Min nTPM: 101.3
RHH5232_R3604
125.9
RHH5204_R3575
101.3
RHH5261_R3633
107.8
RHH5296_R3662
145.8
Vd2 gdTCR nTPM: 117.0
Samples: 4
Max nTPM: 148.6
Min nTPM: 90.5
RHH5234_R3606
93.8
RHH5206_R3577
148.6
RHH5263_R3635
135.1
RHH5298_R3664
90.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
