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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
216.7
nTPM
Monaco:
840.8
nTPM
Schmiedel:
117.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
216.7
HPA sample
nTPM
gdT-cell nTPM: 216.7
Samples: 6
Max nTPM: 269.1
Min nTPM: 171.6
P10809_1007
195.8
P10809_1022
171.6
P10809_1041
235.9
P10809_1060
194.9
P10809_1077
232.7
P10809_1098
269.1
MAIT T-cell nTPM: 139.4
Samples: 6
Max nTPM: 148.8
Min nTPM: 128.1
P10809_1006
128.1
P10809_1024
146.3
P10809_1043
134.3
P10809_1062
148.8
P10809_1083
140.9
P10809_1097
137.7
Memory CD4 T-cell nTPM: 139.5
Samples: 6
Max nTPM: 199.7
Min nTPM: 96.7
P10809_1014
126.5
P10809_1026
96.7
P10809_1045
105.9
P10809_1064
155.2
P10809_1086
199.7
P10809_1113
152.8
Memory CD8 T-cell nTPM: 171.3
Samples: 5
Max nTPM: 227.0
Min nTPM: 124.6
P10809_1012
162.1
P10809_1027
162.2
P10809_1046
124.6
P10809_1065
227.0
P10809_1111
180.4
Naive CD4 T-cell nTPM: 98.1
Samples: 6
Max nTPM: 136.2
Min nTPM: 68.4
P10809_1015
106.6
P10809_1030
73.7
P10809_1049
68.4
P10809_1068
110.6
P10809_1085
136.2
P10809_1112
92.9
Naive CD8 T-cell nTPM: 153.4
Samples: 6
Max nTPM: 271.8
Min nTPM: 97.9
P10809_1016
97.9
P10809_1031
120.4
P10809_1050
129.6
P10809_1069
188.9
P10809_1087
271.8
P10809_1110
111.5
T-reg nTPM: 155.5
Samples: 6
Max nTPM: 206.7
Min nTPM: 98.6
P10809_1018
162.9
P10809_1037
143.3
P10809_1056
98.6
P10809_1075
149.9
P10809_1094
206.7
P10809_1106
171.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
840.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 524.3
Samples: 4
Max nTPM: 584.7
Min nTPM: 456.8
RHH5202_R3573
584.7
RHH5230_R3602
456.8
RHH5259_R3631
495.4
RHH5288_R3660
560.4
Effector memory CD8 T-cell nTPM: 816.2
Samples: 4
Max nTPM: 865.4
Min nTPM: 752.4
RHH5203_R3574
865.4
RHH5231_R3603
860.8
RHH5260_R3632
752.4
RHH5289_R3661
786.1
MAIT T-cell nTPM: 525.8
Samples: 4
Max nTPM: 571.3
Min nTPM: 463.8
RHH5233_R3605
571.3
RHH5205_R3576
500.1
RHH5262_R3634
463.8
RHH5297_R3663
568.1
Memory CD4 T-cell TFH nTPM: 603.4
Samples: 4
Max nTPM: 694.7
Min nTPM: 531.5
RHH5300_R3666
569.4
RHH5236_R3608
618.0
RHH5265_R3637
531.5
RHH5208_R3579
694.7
Memory CD4 T-cell Th1 nTPM: 485.9
Samples: 4
Max nTPM: 546.4
Min nTPM: 426.0
RHH5210_R3581
507.0
RHH5302_R3668
546.4
RHH5238_R3610
464.2
RHH5267_R3639
426.0
Memory CD4 T-cell Th1/Th17 nTPM: 505.9
Samples: 4
Max nTPM: 562.6
Min nTPM: 434.2
RHH5303_R3669
551.5
RHH5211_R3582
562.6
RHH5239_R3611
475.1
RHH5268_R3640
434.2
Memory CD4 T-cell Th17 nTPM: 523.1
Samples: 4
Max nTPM: 561.2
Min nTPM: 472.1
RHH5304_R3670
519.9
RHH5212_R3583
539.1
RHH5240_R3612
561.2
RHH5269_R3641
472.1
Memory CD4 T-cell Th2 nTPM: 535.6
Samples: 4
Max nTPM: 564.6
Min nTPM: 473.8
RHH5305_R3671
545.3
RHH5213_R3584
564.6
RHH5241_R3613
558.7
RHH5270_R3642
473.8
Naive CD4 T-cell nTPM: 381.3
Samples: 4
Max nTPM: 404.1
Min nTPM: 353.4
RHH5306_R3672
384.3
RHH5214_R3585
383.5
RHH5242_R3614
404.1
RHH5271_R3643
353.4
Naive CD8 T-cell nTPM: 336.5
Samples: 4
Max nTPM: 422.6
Min nTPM: 283.4
RHH5201_R3572
422.6
RHH5229_R3601
339.3
RHH5258_R3630
283.4
RHH5287_R3659
300.7
Non-Vd2 gdTCR nTPM: 790.8
Samples: 4
Max nTPM: 946.3
Min nTPM: 683.9
RHH5235_R3607
683.9
RHH5264_R3636
946.3
RHH5207_R3578
822.1
RHH5299_R3665
710.8
T-reg nTPM: 442.5
Samples: 4
Max nTPM: 494.4
Min nTPM: 385.4
RHH5301_R3667
415.9
RHH5237_R3609
474.4
RHH5266_R3638
385.4
RHH5209_R3580
494.4
Terminal effector memory CD4 T-cell nTPM: 731.6
Samples: 2
Max nTPM: 834.2
Min nTPM: 628.9
RHH5243_R3615
628.9
RHH5272_R3644
834.2
Terminal effector memory CD8 T-cell nTPM: 840.8
Samples: 4
Max nTPM: 916.7
Min nTPM: 751.4
RHH5232_R3604
751.4
RHH5204_R3575
831.6
RHH5261_R3633
916.7
RHH5296_R3662
863.6
Vd2 gdTCR nTPM: 751.1
Samples: 4
Max nTPM: 1041.5
Min nTPM: 578.5
RHH5234_R3606
578.5
RHH5206_R3577
1041.5
RHH5263_R3635
759.0
RHH5298_R3664
625.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
