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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
203.1
nTPM
Monaco:
265.5
nTPM
Schmiedel:
118.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
203.1
HPA sample
nTPM
gdT-cell nTPM: 146.1
Samples: 6
Max nTPM: 179.8
Min nTPM: 108.4
P10809_1007
108.4
P10809_1022
179.8
P10809_1041
139.4
P10809_1060
152.6
P10809_1077
148.4
P10809_1098
147.9
MAIT T-cell nTPM: 149.0
Samples: 6
Max nTPM: 185.7
Min nTPM: 102.9
P10809_1006
102.9
P10809_1024
185.7
P10809_1043
149.2
P10809_1062
143.6
P10809_1083
149.1
P10809_1097
163.4
Memory CD4 T-cell nTPM: 156.0
Samples: 6
Max nTPM: 173.0
Min nTPM: 135.0
P10809_1014
135.0
P10809_1026
162.5
P10809_1045
168.4
P10809_1064
159.0
P10809_1086
173.0
P10809_1113
138.3
Memory CD8 T-cell nTPM: 146.5
Samples: 5
Max nTPM: 161.9
Min nTPM: 115.3
P10809_1012
115.3
P10809_1027
161.9
P10809_1046
150.4
P10809_1065
146.9
P10809_1111
158.1
Naive CD4 T-cell nTPM: 153.2
Samples: 6
Max nTPM: 174.4
Min nTPM: 124.9
P10809_1015
124.9
P10809_1030
158.4
P10809_1049
174.4
P10809_1068
158.7
P10809_1085
162.2
P10809_1112
140.4
Naive CD8 T-cell nTPM: 148.1
Samples: 6
Max nTPM: 172.7
Min nTPM: 119.3
P10809_1016
119.3
P10809_1031
162.0
P10809_1050
145.9
P10809_1069
159.6
P10809_1087
172.7
P10809_1110
129.3
T-reg nTPM: 203.1
Samples: 6
Max nTPM: 265.7
Min nTPM: 142.2
P10809_1018
142.2
P10809_1037
265.7
P10809_1056
173.9
P10809_1075
223.9
P10809_1094
202.8
P10809_1106
209.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
265.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 183.0
Samples: 4
Max nTPM: 226.2
Min nTPM: 127.2
RHH5202_R3573
226.2
RHH5230_R3602
184.0
RHH5259_R3631
127.2
RHH5288_R3660
194.6
Effector memory CD8 T-cell nTPM: 265.5
Samples: 4
Max nTPM: 345.7
Min nTPM: 178.1
RHH5203_R3574
345.7
RHH5231_R3603
289.3
RHH5260_R3632
178.1
RHH5289_R3661
248.8
MAIT T-cell nTPM: 196.2
Samples: 4
Max nTPM: 221.1
Min nTPM: 174.2
RHH5233_R3605
208.0
RHH5205_R3576
174.2
RHH5262_R3634
221.1
RHH5297_R3663
181.5
Memory CD4 T-cell TFH nTPM: 233.0
Samples: 4
Max nTPM: 277.9
Min nTPM: 203.5
RHH5300_R3666
203.5
RHH5236_R3608
277.9
RHH5265_R3637
204.2
RHH5208_R3579
246.5
Memory CD4 T-cell Th1 nTPM: 195.3
Samples: 4
Max nTPM: 248.0
Min nTPM: 128.8
RHH5210_R3581
230.2
RHH5302_R3668
248.0
RHH5238_R3610
128.8
RHH5267_R3639
174.1
Memory CD4 T-cell Th1/Th17 nTPM: 214.7
Samples: 4
Max nTPM: 301.2
Min nTPM: 100.2
RHH5303_R3669
270.8
RHH5211_R3582
301.2
RHH5239_R3611
100.2
RHH5268_R3640
186.5
Memory CD4 T-cell Th17 nTPM: 184.1
Samples: 4
Max nTPM: 215.0
Min nTPM: 159.3
RHH5304_R3670
178.8
RHH5212_R3583
215.0
RHH5240_R3612
159.3
RHH5269_R3641
183.2
Memory CD4 T-cell Th2 nTPM: 245.9
Samples: 4
Max nTPM: 271.9
Min nTPM: 228.9
RHH5305_R3671
245.2
RHH5213_R3584
271.9
RHH5241_R3613
228.9
RHH5270_R3642
237.4
Naive CD4 T-cell nTPM: 198.4
Samples: 4
Max nTPM: 251.4
Min nTPM: 159.8
RHH5306_R3672
206.7
RHH5214_R3585
251.4
RHH5242_R3614
175.7
RHH5271_R3643
159.8
Naive CD8 T-cell nTPM: 196.2
Samples: 4
Max nTPM: 245.1
Min nTPM: 93.0
RHH5201_R3572
245.1
RHH5229_R3601
93.0
RHH5258_R3630
239.5
RHH5287_R3659
207.1
Non-Vd2 gdTCR nTPM: 261.1
Samples: 4
Max nTPM: 360.3
Min nTPM: 142.8
RHH5235_R3607
142.8
RHH5264_R3636
360.3
RHH5207_R3578
317.9
RHH5299_R3665
223.3
T-reg nTPM: 233.5
Samples: 4
Max nTPM: 296.1
Min nTPM: 186.4
RHH5301_R3667
228.4
RHH5237_R3609
296.1
RHH5266_R3638
186.4
RHH5209_R3580
223.2
Terminal effector memory CD4 T-cell nTPM: 226.3
Samples: 2
Max nTPM: 261.5
Min nTPM: 191.1
RHH5243_R3615
191.1
RHH5272_R3644
261.5
Terminal effector memory CD8 T-cell nTPM: 264.5
Samples: 4
Max nTPM: 323.4
Min nTPM: 177.6
RHH5232_R3604
295.5
RHH5204_R3575
261.6
RHH5261_R3633
177.6
RHH5296_R3662
323.4
Vd2 gdTCR nTPM: 238.6
Samples: 4
Max nTPM: 328.0
Min nTPM: 192.9
RHH5234_R3606
223.0
RHH5206_R3577
328.0
RHH5263_R3635
192.9
RHH5298_R3664
210.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.