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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
28.4
nTPM
Monaco:
88.2
nTPM
Schmiedel:
132.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
28.4
HPA sample
nTPM
gdT-cell nTPM: 19.3
Samples: 6
Max nTPM: 53.9
Min nTPM: 5.2
P10809_1007
53.9
P10809_1022
10.6
P10809_1041
19.4
P10809_1060
5.2
P10809_1077
15.5
P10809_1098
11.4
MAIT T-cell nTPM: 14.6
Samples: 6
Max nTPM: 33.7
Min nTPM: 5.2
P10809_1006
33.7
P10809_1024
7.0
P10809_1043
12.5
P10809_1062
5.2
P10809_1083
6.1
P10809_1097
23.3
Memory CD4 T-cell nTPM: 27.5
Samples: 6
Max nTPM: 53.8
Min nTPM: 5.2
P10809_1014
53.8
P10809_1026
22.3
P10809_1045
46.3
P10809_1064
31.3
P10809_1086
6.1
P10809_1113
5.2
Memory CD8 T-cell nTPM: 28.4
Samples: 5
Max nTPM: 55.5
Min nTPM: 7.1
P10809_1012
55.5
P10809_1027
7.1
P10809_1046
50.4
P10809_1065
13.4
P10809_1111
15.5
Naive CD4 T-cell nTPM: 16.1
Samples: 6
Max nTPM: 38.4
Min nTPM: 7.1
P10809_1015
27.9
P10809_1030
7.9
P10809_1049
38.4
P10809_1068
7.1
P10809_1085
7.5
P10809_1112
7.5
Naive CD8 T-cell nTPM: 14.0
Samples: 6
Max nTPM: 22.0
Min nTPM: 3.9
P10809_1016
19.1
P10809_1031
10.8
P10809_1050
14.7
P10809_1069
22.0
P10809_1087
3.9
P10809_1110
13.7
T-reg nTPM: 25.1
Samples: 6
Max nTPM: 86.7
Min nTPM: 9.5
P10809_1018
14.0
P10809_1037
13.6
P10809_1056
86.7
P10809_1075
16.4
P10809_1094
9.5
P10809_1106
10.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
88.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 47.9
Samples: 4
Max nTPM: 105.6
Min nTPM: 1.9
RHH5202_R3573
1.9
RHH5230_R3602
105.6
RHH5259_R3631
73.8
RHH5288_R3660
10.4
Effector memory CD8 T-cell nTPM: 68.6
Samples: 4
Max nTPM: 134.0
Min nTPM: 3.6
RHH5203_R3574
31.9
RHH5231_R3603
104.7
RHH5260_R3632
134.0
RHH5289_R3661
3.6
MAIT T-cell nTPM: 47.5
Samples: 4
Max nTPM: 119.7
Min nTPM: 4.1
RHH5233_R3605
4.1
RHH5205_R3576
40.7
RHH5262_R3634
119.7
RHH5297_R3663
25.3
Memory CD4 T-cell TFH nTPM: 48.5
Samples: 4
Max nTPM: 105.8
Min nTPM: 0.0
RHH5300_R3666
49.8
RHH5236_R3608
105.8
RHH5265_R3637
38.4
RHH5208_R3579
0.0
Memory CD4 T-cell Th1 nTPM: 67.2
Samples: 4
Max nTPM: 118.1
Min nTPM: 23.9
RHH5210_R3581
34.7
RHH5302_R3668
23.9
RHH5238_R3610
91.9
RHH5267_R3639
118.1
Memory CD4 T-cell Th1/Th17 nTPM: 60.2
Samples: 4
Max nTPM: 114.8
Min nTPM: 3.9
RHH5303_R3669
3.9
RHH5211_R3582
68.9
RHH5239_R3611
53.2
RHH5268_R3640
114.8
Memory CD4 T-cell Th17 nTPM: 74.6
Samples: 4
Max nTPM: 149.9
Min nTPM: 1.6
RHH5304_R3670
14.5
RHH5212_R3583
132.4
RHH5240_R3612
1.6
RHH5269_R3641
149.9
Memory CD4 T-cell Th2 nTPM: 71.6
Samples: 4
Max nTPM: 153.9
Min nTPM: 3.2
RHH5305_R3671
33.0
RHH5213_R3584
96.4
RHH5241_R3613
3.2
RHH5270_R3642
153.9
Naive CD4 T-cell nTPM: 61.9
Samples: 4
Max nTPM: 89.1
Min nTPM: 24.5
RHH5306_R3672
64.0
RHH5214_R3585
89.1
RHH5242_R3614
24.5
RHH5271_R3643
70.0
Naive CD8 T-cell nTPM: 40.5
Samples: 4
Max nTPM: 61.3
Min nTPM: 1.4
RHH5201_R3572
1.4
RHH5229_R3601
61.3
RHH5258_R3630
58.1
RHH5287_R3659
41.1
Non-Vd2 gdTCR nTPM: 58.2
Samples: 4
Max nTPM: 143.0
Min nTPM: 2.4
RHH5235_R3607
143.0
RHH5264_R3636
2.4
RHH5207_R3578
9.1
RHH5299_R3665
78.2
T-reg nTPM: 76.3
Samples: 4
Max nTPM: 105.6
Min nTPM: 51.8
RHH5301_R3667
51.8
RHH5237_R3609
105.6
RHH5266_R3638
88.6
RHH5209_R3580
59.3
Terminal effector memory CD4 T-cell nTPM: 88.2
Samples: 2
Max nTPM: 159.2
Min nTPM: 17.1
RHH5243_R3615
159.2
RHH5272_R3644
17.1
Terminal effector memory CD8 T-cell nTPM: 61.7
Samples: 4
Max nTPM: 168.9
Min nTPM: 13.5
RHH5232_R3604
17.1
RHH5204_R3575
47.2
RHH5261_R3633
168.9
RHH5296_R3662
13.5
Vd2 gdTCR nTPM: 56.0
Samples: 4
Max nTPM: 78.7
Min nTPM: 40.8
RHH5234_R3606
78.7
RHH5206_R3577
44.5
RHH5263_R3635
60.0
RHH5298_R3664
40.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
