We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
14.8
nTPM
Monaco:
21.6
nTPM
Schmiedel:
109.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
14.8
HPA sample
nTPM
gdT-cell nTPM: 9.9
Samples: 6
Max nTPM: 11.7
Min nTPM: 6.2
P10809_1007
6.2
P10809_1022
11.7
P10809_1041
10.6
P10809_1060
10.5
P10809_1077
11.3
P10809_1098
9.1
MAIT T-cell nTPM: 14.8
Samples: 6
Max nTPM: 22.3
Min nTPM: 9.1
P10809_1006
10.8
P10809_1024
22.3
P10809_1043
9.1
P10809_1062
14.2
P10809_1083
16.1
P10809_1097
16.3
Memory CD4 T-cell nTPM: 11.7
Samples: 6
Max nTPM: 13.9
Min nTPM: 9.3
P10809_1014
11.6
P10809_1026
10.3
P10809_1045
11.7
P10809_1064
9.3
P10809_1086
13.9
P10809_1113
13.4
Memory CD8 T-cell nTPM: 12.4
Samples: 5
Max nTPM: 14.8
Min nTPM: 10.8
P10809_1012
11.6
P10809_1027
10.8
P10809_1046
11.6
P10809_1065
13.0
P10809_1111
14.8
Naive CD4 T-cell nTPM: 13.5
Samples: 6
Max nTPM: 16.2
Min nTPM: 12.0
P10809_1015
12.7
P10809_1030
14.4
P10809_1049
12.4
P10809_1068
16.2
P10809_1085
13.5
P10809_1112
12.0
Naive CD8 T-cell nTPM: 13.4
Samples: 6
Max nTPM: 15.4
Min nTPM: 10.3
P10809_1016
10.3
P10809_1031
15.3
P10809_1050
13.0
P10809_1069
15.4
P10809_1087
11.8
P10809_1110
14.8
T-reg nTPM: 12.9
Samples: 6
Max nTPM: 21.2
Min nTPM: 7.3
P10809_1018
10.6
P10809_1037
7.3
P10809_1056
13.0
P10809_1075
14.2
P10809_1094
11.0
P10809_1106
21.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
21.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 12.8
Samples: 4
Max nTPM: 25.9
Min nTPM: 3.2
RHH5202_R3573
25.9
RHH5230_R3602
3.2
RHH5259_R3631
10.5
RHH5288_R3660
11.4
Effector memory CD8 T-cell nTPM: 21.6
Samples: 4
Max nTPM: 28.4
Min nTPM: 10.1
RHH5203_R3574
28.4
RHH5231_R3603
24.7
RHH5260_R3632
10.1
RHH5289_R3661
23.1
MAIT T-cell nTPM: 13.3
Samples: 4
Max nTPM: 18.6
Min nTPM: 8.0
RHH5233_R3605
8.0
RHH5205_R3576
17.1
RHH5262_R3634
9.4
RHH5297_R3663
18.6
Memory CD4 T-cell TFH nTPM: 20.5
Samples: 4
Max nTPM: 33.4
Min nTPM: 7.1
RHH5300_R3666
12.2
RHH5236_R3608
29.2
RHH5265_R3637
7.1
RHH5208_R3579
33.4
Memory CD4 T-cell Th1 nTPM: 15.4
Samples: 4
Max nTPM: 23.0
Min nTPM: 6.7
RHH5210_R3581
23.0
RHH5302_R3668
14.1
RHH5238_R3610
17.7
RHH5267_R3639
6.7
Memory CD4 T-cell Th1/Th17 nTPM: 15.6
Samples: 4
Max nTPM: 35.3
Min nTPM: 2.1
RHH5303_R3669
2.1
RHH5211_R3582
35.3
RHH5239_R3611
9.9
RHH5268_R3640
14.9
Memory CD4 T-cell Th17 nTPM: 14.0
Samples: 4
Max nTPM: 19.8
Min nTPM: 8.9
RHH5304_R3670
8.9
RHH5212_R3583
19.8
RHH5240_R3612
14.4
RHH5269_R3641
12.9
Memory CD4 T-cell Th2 nTPM: 16.1
Samples: 4
Max nTPM: 22.6
Min nTPM: 11.2
RHH5305_R3671
16.0
RHH5213_R3584
14.6
RHH5241_R3613
22.6
RHH5270_R3642
11.2
Naive CD4 T-cell nTPM: 13.1
Samples: 4
Max nTPM: 20.6
Min nTPM: 1.5
RHH5306_R3672
1.5
RHH5214_R3585
20.6
RHH5242_R3614
11.9
RHH5271_R3643
18.2
Naive CD8 T-cell nTPM: 16.3
Samples: 4
Max nTPM: 21.9
Min nTPM: 11.7
RHH5201_R3572
21.9
RHH5229_R3601
15.3
RHH5258_R3630
16.4
RHH5287_R3659
11.7
Non-Vd2 gdTCR nTPM: 9.1
Samples: 4
Max nTPM: 12.4
Min nTPM: 4.1
RHH5235_R3607
9.4
RHH5264_R3636
10.5
RHH5207_R3578
4.1
RHH5299_R3665
12.4
T-reg nTPM: 15.7
Samples: 4
Max nTPM: 23.2
Min nTPM: 4.7
RHH5301_R3667
4.7
RHH5237_R3609
23.2
RHH5266_R3638
20.3
RHH5209_R3580
14.7
Terminal effector memory CD4 T-cell nTPM: 21.6
Samples: 2
Max nTPM: 23.6
Min nTPM: 19.5
RHH5243_R3615
23.6
RHH5272_R3644
19.5
Terminal effector memory CD8 T-cell nTPM: 4.6
Samples: 4
Max nTPM: 8.3
Min nTPM: 2.1
RHH5232_R3604
3.2
RHH5204_R3575
8.3
RHH5261_R3633
4.8
RHH5296_R3662
2.1
Vd2 gdTCR nTPM: 12.1
Samples: 4
Max nTPM: 19.4
Min nTPM: 8.0
RHH5234_R3606
8.0
RHH5206_R3577
19.4
RHH5263_R3635
9.8
RHH5298_R3664
11.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
