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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
167.9
nTPM
Monaco:
358.2
nTPM
Schmiedel:
456.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
167.9
HPA sample
nTPM
gdT-cell nTPM: 153.8
Samples: 6
Max nTPM: 187.8
Min nTPM: 119.9
P10809_1007
119.9
P10809_1022
187.8
P10809_1041
180.3
P10809_1060
130.5
P10809_1077
145.4
P10809_1098
158.8
MAIT T-cell nTPM: 165.5
Samples: 6
Max nTPM: 200.9
Min nTPM: 142.6
P10809_1006
159.9
P10809_1024
200.9
P10809_1043
161.6
P10809_1062
163.9
P10809_1083
142.6
P10809_1097
163.9
Memory CD4 T-cell nTPM: 148.5
Samples: 6
Max nTPM: 168.3
Min nTPM: 128.0
P10809_1014
128.0
P10809_1026
140.6
P10809_1045
168.3
P10809_1064
140.0
P10809_1086
158.7
P10809_1113
155.4
Memory CD8 T-cell nTPM: 157.0
Samples: 5
Max nTPM: 172.7
Min nTPM: 133.9
P10809_1012
133.9
P10809_1027
166.3
P10809_1046
164.8
P10809_1065
147.1
P10809_1111
172.7
Naive CD4 T-cell nTPM: 148.0
Samples: 6
Max nTPM: 162.5
Min nTPM: 128.0
P10809_1015
128.0
P10809_1030
139.4
P10809_1049
162.5
P10809_1068
148.4
P10809_1085
154.6
P10809_1112
154.8
Naive CD8 T-cell nTPM: 149.5
Samples: 6
Max nTPM: 169.9
Min nTPM: 129.2
P10809_1016
129.2
P10809_1031
145.8
P10809_1050
169.9
P10809_1069
153.9
P10809_1087
168.8
P10809_1110
129.5
T-reg nTPM: 167.9
Samples: 6
Max nTPM: 196.0
Min nTPM: 150.3
P10809_1018
150.8
P10809_1037
180.5
P10809_1056
196.0
P10809_1075
156.2
P10809_1094
150.3
P10809_1106
173.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
358.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 300.0
Samples: 4
Max nTPM: 357.1
Min nTPM: 248.5
RHH5202_R3573
328.7
RHH5230_R3602
265.6
RHH5259_R3631
357.1
RHH5288_R3660
248.5
Effector memory CD8 T-cell nTPM: 332.6
Samples: 4
Max nTPM: 360.8
Min nTPM: 272.6
RHH5203_R3574
337.9
RHH5231_R3603
272.6
RHH5260_R3632
360.8
RHH5289_R3661
359.1
MAIT T-cell nTPM: 318.8
Samples: 4
Max nTPM: 363.6
Min nTPM: 256.1
RHH5233_R3605
363.5
RHH5205_R3576
363.6
RHH5262_R3634
291.8
RHH5297_R3663
256.1
Memory CD4 T-cell TFH nTPM: 298.4
Samples: 4
Max nTPM: 355.1
Min nTPM: 240.1
RHH5300_R3666
240.1
RHH5236_R3608
283.0
RHH5265_R3637
315.4
RHH5208_R3579
355.1
Memory CD4 T-cell Th1 nTPM: 306.9
Samples: 4
Max nTPM: 366.8
Min nTPM: 273.5
RHH5210_R3581
300.6
RHH5302_R3668
273.5
RHH5238_R3610
366.8
RHH5267_R3639
286.5
Memory CD4 T-cell Th1/Th17 nTPM: 344.0
Samples: 4
Max nTPM: 375.9
Min nTPM: 314.8
RHH5303_R3669
317.1
RHH5211_R3582
375.9
RHH5239_R3611
368.2
RHH5268_R3640
314.8
Memory CD4 T-cell Th17 nTPM: 358.3
Samples: 4
Max nTPM: 438.0
Min nTPM: 304.6
RHH5304_R3670
350.8
RHH5212_R3583
339.6
RHH5240_R3612
438.0
RHH5269_R3641
304.6
Memory CD4 T-cell Th2 nTPM: 312.7
Samples: 4
Max nTPM: 350.3
Min nTPM: 285.4
RHH5305_R3671
295.9
RHH5213_R3584
350.3
RHH5241_R3613
285.4
RHH5270_R3642
319.2
Naive CD4 T-cell nTPM: 313.7
Samples: 4
Max nTPM: 342.5
Min nTPM: 279.3
RHH5306_R3672
321.9
RHH5214_R3585
310.9
RHH5242_R3614
279.3
RHH5271_R3643
342.5
Naive CD8 T-cell nTPM: 338.2
Samples: 4
Max nTPM: 372.6
Min nTPM: 273.0
RHH5201_R3572
371.0
RHH5229_R3601
372.6
RHH5258_R3630
273.0
RHH5287_R3659
336.0
Non-Vd2 gdTCR nTPM: 312.4
Samples: 4
Max nTPM: 341.2
Min nTPM: 279.3
RHH5235_R3607
279.3
RHH5264_R3636
341.2
RHH5207_R3578
338.7
RHH5299_R3665
290.3
T-reg nTPM: 290.6
Samples: 4
Max nTPM: 318.8
Min nTPM: 244.1
RHH5301_R3667
244.1
RHH5237_R3609
318.8
RHH5266_R3638
298.0
RHH5209_R3580
301.3
Terminal effector memory CD4 T-cell nTPM: 355.3
Samples: 2
Max nTPM: 392.8
Min nTPM: 317.7
RHH5243_R3615
392.8
RHH5272_R3644
317.7
Terminal effector memory CD8 T-cell nTPM: 336.9
Samples: 4
Max nTPM: 384.5
Min nTPM: 303.8
RHH5232_R3604
322.1
RHH5204_R3575
303.8
RHH5261_R3633
384.5
RHH5296_R3662
337.0
Vd2 gdTCR nTPM: 294.8
Samples: 4
Max nTPM: 324.1
Min nTPM: 227.8
RHH5234_R3606
324.1
RHH5206_R3577
309.5
RHH5263_R3635
317.7
RHH5298_R3664
227.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.