HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:18.9 nTPM
HPA Brain:116.5 nTPM
GTEx:18.9 nTPM
FANTOM5:61.8 Scaled Tags Per Million
Pig:124.0 nTPM
Mouse:94.9 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA076565
Glial cells Low
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 116.5
Sample id Sample description nTPM
Hippocampus
nTPM: 116.5
2621 Female, age 67, right hemisphere 157.9
1898 Male, age 80, left hemisphere 124.0
2148 Female, age 91, left hemisphere 109.8
1911 Female, age 85, right hemisphere 108.6
1855 Male, age 76, left hemisphere 103.9
2529 Female, age 94, left hemisphere 94.7
Dentate gyrus
nTPM: 111.0
2530 Female, age 94, left hemisphere 188.1
1927 Female, age 91, both hemispheres 142.8
2010 Male, age 76, both hemispheres 98.9
2246 Female, age 85, both hemispheres 86.0
2531 Female, age 67, both hemispheres 85.0
2528 Male, age 74, both hemispheres 65.3
Entorhinal gyrus
nTPM: 79.8
2613 Female, age 94, left hemisphere 98.3
1938 Female, age 85, left hemisphere 90.3
2686 Male, age 75, right hemisphere 87.5
2764 Male, age 80, right hemisphere 80.1
1787 Male, age 76, left hemisphere 69.9
2117 Female, age 91, right hemisphere 52.9
Hippocampus, CA1
nTPM: 110.3
2749 Male, age 80, left hemisphere 186.2
1873 Female, age 85, both hemispheres 124.6
2527 Male, age 74, both hemispheres 107.5
2045 Male, age 76, both hemispheres 72.1
2082 Female, age 91, right hemisphere 61.0
Hippocampus, CA2
nTPM: 102.9
1963 Male, age 80, left hemisphere 176.2
1892 Male, age 76, both hemispheres 117.6
2437 Female, age 94, left hemisphere 107.8
2249 Male, age 74, both hemispheres 85.8
2113 Female, age 91, right hemisphere 69.8
1940 Female, age 85, left hemisphere 60.3
Hippocampus, CA3
nTPM: 98.5
2137 Male, age 80, left hemisphere 144.4
2861 Female, age 67, both hemispheres 135.1
2620 Female, age 94, left hemisphere 90.0
1867 Male, age 76, both hemispheres 84.1
1891 Female, age 85, both hemispheres 72.0
2436 Male, age 74, both hemispheres 65.6
Parahippocampal cortex
nTPM: 91.5
2245 Female, age 91, both hemispheres 123.2
2250 Female, age 67, right hemisphere 105.4
1850 Male, age 80, both hemispheres 100.1
2622 Female, age 67, right hemisphere 98.0
2532 Female, age 72, left hemisphere 92.7
2693 Female, age 94, both hemispheres 84.0
1990 Female, age 91, right hemisphere 82.8
1933 Female, age 85, both hemispheres 81.7
2018 Male, age 76, both hemispheres 78.0
2692 Male, age 74, both hemispheres 68.8
Perirhinal gyrus
nTPM: 97.2
1847 Female, age 91, left hemisphere 111.5
1841 Female, age 85, right hemisphere 104.4
1794 Male, age 80, right hemisphere 97.9
2848 Male, age 76, right hemisphere 94.7
2521 Female, age 94, right hemisphere 77.6
Subiculum
nTPM: 74.0
1901 Male, age 80, both hemispheres 87.3
2438 Female, age 94, left hemisphere 80.4
2042 Male, age 76, both hemispheres 76.3
1977 Female, age 85, both hemispheres 75.2
2619 Male, age 74, both hemispheres 64.2
2729 Female, age 91, right hemisphere 60.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.9
Samples: 197

Max nTPM: 91.4
Min nTPM: 0.8
Std nTPM: 12.9
Median nTPM: 16.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 91.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 65.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 55.2
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 50.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 47.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 46.6
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 45.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 45.1
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 44.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 39.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 38.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.8
FF:10169-103B7 60 years, female 65.4
FF:10153-102I9 76 years, female 58.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 124.0
Pig sample Sample description nTPM
Subiculum
nTPM: 88.0
Samples: 4

Max nTPM: 120.8
Min nTPM: 72.5
Sample A Female 120.8
Sample B Female 83.8
Sample C Male 72.5
Sample D Male 75.0
Dorsal hippocampus
nTPM: 89.8
Samples: 4

Max nTPM: 127.7
Min nTPM: 71.0
Sample A Female 127.7
Sample B Female 89.2
Sample C Male 71.1
Sample D Male 71.0
Entorhinal cortex
nTPM: 124.0
Samples: 4

Max nTPM: 156.9
Min nTPM: 109.3
Sample A Female 114.8
Sample B Female 156.9
Sample C Male 114.8
Sample D Male 109.3
Ventral hippocampus
nTPM: 86.1
Samples: 4

Max nTPM: 104.5
Min nTPM: 73.7
Sample A Female 104.5
Sample B Female 79.1
Sample C Male 87.1
Sample D Male 73.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 94.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.8
Samples: 4

Max nTPM: 99.2
Min nTPM: 83.5
Sample A Male 98.2
Sample B Male 98.4
Sample C Female 83.5
Sample D Female 99.2
Hippocampal formation
nTPM: 62.8
Samples: 4

Max nTPM: 68.9
Min nTPM: 54.9
Sample A Male 68.9
Sample B Male 60.0
Sample C Female 67.4
Sample D Female 54.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
69013774 Antisense, RP_050310_01_A01, Mouse strain C57BL/6J (56 days, male) 6.7
73514899 Antisense, RP_051121_03_D01, Mouse strain C57BL/6J (56 days, male) 2.6

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