HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:17.5 nTPM
HPA Brain:46.1 nTPM
GTEx:17.5 nTPM
FANTOM5:117.2 Scaled Tags Per Million
Pig:116.7 nTPM
Mouse:100.2 nTPM
Allen mouse:10.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001467Antibody CAB062564
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.1
Sample id Sample description nTPM
Hippocampus
nTPM: 40.0
1898 Male, age 80, left hemisphere 47.3
2621 Female, age 67, right hemisphere 41.3
1855 Male, age 76, left hemisphere 40.4
2529 Female, age 94, left hemisphere 40.4
1911 Female, age 85, right hemisphere 37.2
2148 Female, age 91, left hemisphere 33.5
Dentate gyrus
nTPM: 38.0
2010 Male, age 76, both hemispheres 48.5
1927 Female, age 91, both hemispheres 40.8
2530 Female, age 94, left hemisphere 39.6
2246 Female, age 85, both hemispheres 35.2
2528 Male, age 74, both hemispheres 33.8
2531 Female, age 67, both hemispheres 29.9
Entorhinal gyrus
nTPM: 41.7
2764 Male, age 80, right hemisphere 45.1
1938 Female, age 85, left hemisphere 44.1
2117 Female, age 91, right hemisphere 43.6
1787 Male, age 76, left hemisphere 43.5
2613 Female, age 94, left hemisphere 39.7
2686 Male, age 75, right hemisphere 34.4
Hippocampus, CA1
nTPM: 43.8
2749 Male, age 80, left hemisphere 66.0
1873 Female, age 85, both hemispheres 42.7
2045 Male, age 76, both hemispheres 37.2
2527 Male, age 74, both hemispheres 37.1
2082 Female, age 91, right hemisphere 35.8
Hippocampus, CA2
nTPM: 42.6
1892 Male, age 76, both hemispheres 57.8
1963 Male, age 80, left hemisphere 47.9
1940 Female, age 85, left hemisphere 42.7
2113 Female, age 91, right hemisphere 36.8
2249 Male, age 74, both hemispheres 35.8
2437 Female, age 94, left hemisphere 35.0
Hippocampus, CA3
nTPM: 37.0
1867 Male, age 76, both hemispheres 52.7
1891 Female, age 85, both hemispheres 42.5
2137 Male, age 80, left hemisphere 40.4
2436 Male, age 74, both hemispheres 32.1
2620 Female, age 94, left hemisphere 27.4
2861 Female, age 67, both hemispheres 27.1
Parahippocampal cortex
nTPM: 40.6
1850 Male, age 80, both hemispheres 52.3
2018 Male, age 76, both hemispheres 48.2
1990 Female, age 91, right hemisphere 45.9
1933 Female, age 85, both hemispheres 45.5
2532 Female, age 72, left hemisphere 40.1
2693 Female, age 94, both hemispheres 37.8
2245 Female, age 91, both hemispheres 36.5
2250 Female, age 67, right hemisphere 35.9
2692 Male, age 74, both hemispheres 33.3
2622 Female, age 67, right hemisphere 30.4
Perirhinal gyrus
nTPM: 46.1
1794 Male, age 80, right hemisphere 52.0
1847 Female, age 91, left hemisphere 50.7
1841 Female, age 85, right hemisphere 46.9
2848 Male, age 76, right hemisphere 43.2
2521 Female, age 94, right hemisphere 37.7
Subiculum
nTPM: 43.1
1977 Female, age 85, both hemispheres 51.7
2042 Male, age 76, both hemispheres 44.8
1901 Male, age 80, both hemispheres 44.4
2438 Female, age 94, left hemisphere 43.4
2729 Female, age 91, right hemisphere 37.8
2619 Male, age 74, both hemispheres 36.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.5
Samples: 197

Max nTPM: 30.9
Min nTPM: 7.8
Std nTPM: 4.8
Median nTPM: 17.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 30.9
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 30.1
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 29.3
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 29.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 28.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 27.3
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 27.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 26.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 26.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 25.2
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 25.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 117.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 117.2
FF:10153-102I9 76 years, female 122.2
FF:10169-103B7 60 years, female 112.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 116.7
Pig sample Sample description nTPM
Subiculum
nTPM: 112.9
Samples: 4

Max nTPM: 148.2
Min nTPM: 95.0
Sample A Female 148.2
Sample B Female 99.6
Sample C Male 95.0
Sample D Male 108.6
Dorsal hippocampus
nTPM: 116.7
Samples: 4

Max nTPM: 149.4
Min nTPM: 97.9
Sample A Female 149.4
Sample B Female 104.5
Sample C Male 114.8
Sample D Male 97.9
Entorhinal cortex
nTPM: 97.0
Samples: 4

Max nTPM: 107.5
Min nTPM: 78.4
Sample A Female 101.5
Sample B Female 107.5
Sample C Male 100.6
Sample D Male 78.4
Ventral hippocampus
nTPM: 103.4
Samples: 4

Max nTPM: 134.0
Min nTPM: 82.7
Sample A Female 134.0
Sample B Female 82.7
Sample C Male 96.0
Sample D Male 101.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 100.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 100.2
Samples: 4

Max nTPM: 103.0
Min nTPM: 96.9
Sample A Male 96.9
Sample B Male 103.0
Sample C Female 99.7
Sample D Female 101.3
Hippocampal formation
nTPM: 97.9
Samples: 4

Max nTPM: 110.9
Min nTPM: 87.9
Sample A Male 110.9
Sample B Male 94.9
Sample C Female 97.8
Sample D Female 87.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.3
69887415 Antisense, RP_050512_03_F07, Mouse strain C57BL/6J (56 days, male) 10.3

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