We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
55.4
nTPM
Monaco:
97.2
nTPM
Schmiedel:
25.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
55.4
HPA sample
nTPM
gdT-cell nTPM: 55.4
Samples: 6
Max nTPM: 71.8
Min nTPM: 37.8
P10809_1007
37.8
P10809_1022
71.8
P10809_1041
55.8
P10809_1060
55.5
P10809_1077
50.2
P10809_1098
61.5
MAIT T-cell nTPM: 53.2
Samples: 6
Max nTPM: 60.0
Min nTPM: 49.2
P10809_1006
52.5
P10809_1024
50.7
P10809_1043
52.2
P10809_1062
54.5
P10809_1083
49.2
P10809_1097
60.0
Memory CD4 T-cell nTPM: 38.6
Samples: 6
Max nTPM: 43.9
Min nTPM: 33.4
P10809_1014
33.9
P10809_1026
41.5
P10809_1045
37.2
P10809_1064
43.9
P10809_1086
41.7
P10809_1113
33.4
Memory CD8 T-cell nTPM: 52.0
Samples: 5
Max nTPM: 55.8
Min nTPM: 43.6
P10809_1012
43.6
P10809_1027
51.2
P10809_1046
54.8
P10809_1065
54.5
P10809_1111
55.8
Naive CD4 T-cell nTPM: 23.7
Samples: 6
Max nTPM: 31.2
Min nTPM: 18.4
P10809_1015
20.7
P10809_1030
22.2
P10809_1049
18.4
P10809_1068
31.2
P10809_1085
27.0
P10809_1112
22.6
Naive CD8 T-cell nTPM: 33.8
Samples: 6
Max nTPM: 44.1
Min nTPM: 18.0
P10809_1016
18.0
P10809_1031
33.4
P10809_1050
39.8
P10809_1069
42.1
P10809_1087
44.1
P10809_1110
25.3
T-reg nTPM: 50.3
Samples: 6
Max nTPM: 69.7
Min nTPM: 36.8
P10809_1018
55.0
P10809_1037
52.6
P10809_1056
44.3
P10809_1075
36.8
P10809_1094
69.7
P10809_1106
43.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
97.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 58.7
Samples: 4
Max nTPM: 64.8
Min nTPM: 44.3
RHH5202_R3573
44.3
RHH5230_R3602
64.8
RHH5259_R3631
63.3
RHH5288_R3660
62.2
Effector memory CD8 T-cell nTPM: 96.6
Samples: 4
Max nTPM: 126.2
Min nTPM: 66.9
RHH5203_R3574
96.2
RHH5231_R3603
66.9
RHH5260_R3632
97.1
RHH5289_R3661
126.2
MAIT T-cell nTPM: 87.1
Samples: 4
Max nTPM: 117.5
Min nTPM: 66.2
RHH5233_R3605
73.4
RHH5205_R3576
117.5
RHH5262_R3634
66.2
RHH5297_R3663
91.3
Memory CD4 T-cell TFH nTPM: 50.4
Samples: 4
Max nTPM: 60.5
Min nTPM: 37.1
RHH5300_R3666
58.7
RHH5236_R3608
45.4
RHH5265_R3637
60.5
RHH5208_R3579
37.1
Memory CD4 T-cell Th1 nTPM: 57.6
Samples: 4
Max nTPM: 70.4
Min nTPM: 40.2
RHH5210_R3581
55.8
RHH5302_R3668
64.1
RHH5238_R3610
40.2
RHH5267_R3639
70.4
Memory CD4 T-cell Th1/Th17 nTPM: 72.5
Samples: 4
Max nTPM: 80.8
Min nTPM: 65.0
RHH5303_R3669
77.6
RHH5211_R3582
66.6
RHH5239_R3611
80.8
RHH5268_R3640
65.0
Memory CD4 T-cell Th17 nTPM: 65.6
Samples: 4
Max nTPM: 74.4
Min nTPM: 54.2
RHH5304_R3670
74.4
RHH5212_R3583
66.2
RHH5240_R3612
54.2
RHH5269_R3641
67.7
Memory CD4 T-cell Th2 nTPM: 56.1
Samples: 4
Max nTPM: 73.8
Min nTPM: 38.3
RHH5305_R3671
47.6
RHH5213_R3584
64.7
RHH5241_R3613
38.3
RHH5270_R3642
73.8
Naive CD4 T-cell nTPM: 31.6
Samples: 4
Max nTPM: 39.1
Min nTPM: 26.7
RHH5306_R3672
31.4
RHH5214_R3585
39.1
RHH5242_R3614
26.7
RHH5271_R3643
29.2
Naive CD8 T-cell nTPM: 29.7
Samples: 4
Max nTPM: 36.8
Min nTPM: 24.7
RHH5201_R3572
24.7
RHH5229_R3601
28.4
RHH5258_R3630
36.8
RHH5287_R3659
29.0
Non-Vd2 gdTCR nTPM: 97.2
Samples: 4
Max nTPM: 112.8
Min nTPM: 91.4
RHH5235_R3607
91.4
RHH5264_R3636
112.8
RHH5207_R3578
92.5
RHH5299_R3665
91.9
T-reg nTPM: 56.4
Samples: 4
Max nTPM: 66.4
Min nTPM: 47.8
RHH5301_R3667
48.0
RHH5237_R3609
63.4
RHH5266_R3638
47.8
RHH5209_R3580
66.4
Terminal effector memory CD4 T-cell nTPM: 90.9
Samples: 2
Max nTPM: 101.9
Min nTPM: 79.9
RHH5243_R3615
101.9
RHH5272_R3644
79.9
Terminal effector memory CD8 T-cell nTPM: 93.6
Samples: 4
Max nTPM: 104.5
Min nTPM: 83.3
RHH5232_R3604
87.3
RHH5204_R3575
83.3
RHH5261_R3633
104.5
RHH5296_R3662
99.1
Vd2 gdTCR nTPM: 89.1
Samples: 4
Max nTPM: 126.2
Min nTPM: 66.9
RHH5234_R3606
67.9
RHH5206_R3577
95.4
RHH5263_R3635
126.2
RHH5298_R3664
66.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
