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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
44.7
nTPM
Monaco:
107.4
nTPM
Schmiedel:
61.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
44.7
HPA sample
nTPM
gdT-cell nTPM: 37.6
Samples: 6
Max nTPM: 52.0
Min nTPM: 29.4
P10809_1007
29.8
P10809_1022
52.0
P10809_1041
29.4
P10809_1060
39.6
P10809_1077
33.2
P10809_1098
41.8
MAIT T-cell nTPM: 35.5
Samples: 6
Max nTPM: 40.8
Min nTPM: 24.3
P10809_1006
38.0
P10809_1024
40.8
P10809_1043
39.9
P10809_1062
35.9
P10809_1083
24.3
P10809_1097
33.8
Memory CD4 T-cell nTPM: 39.1
Samples: 6
Max nTPM: 45.4
Min nTPM: 30.8
P10809_1014
30.8
P10809_1026
45.4
P10809_1045
43.2
P10809_1064
38.5
P10809_1086
35.0
P10809_1113
41.9
Memory CD8 T-cell nTPM: 38.7
Samples: 5
Max nTPM: 50.4
Min nTPM: 28.3
P10809_1012
42.3
P10809_1027
28.3
P10809_1046
50.4
P10809_1065
39.8
P10809_1111
32.9
Naive CD4 T-cell nTPM: 44.7
Samples: 6
Max nTPM: 50.6
Min nTPM: 35.7
P10809_1015
35.7
P10809_1030
50.6
P10809_1049
48.3
P10809_1068
46.6
P10809_1085
37.3
P10809_1112
49.5
Naive CD8 T-cell nTPM: 40.5
Samples: 6
Max nTPM: 47.9
Min nTPM: 33.8
P10809_1016
36.5
P10809_1031
41.4
P10809_1050
47.9
P10809_1069
36.8
P10809_1087
33.8
P10809_1110
46.5
T-reg nTPM: 41.2
Samples: 6
Max nTPM: 50.6
Min nTPM: 26.2
P10809_1018
50.6
P10809_1037
45.8
P10809_1056
36.4
P10809_1075
26.2
P10809_1094
46.7
P10809_1106
41.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
107.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 107.3
Samples: 4
Max nTPM: 122.3
Min nTPM: 74.1
RHH5202_R3573
119.1
RHH5230_R3602
113.6
RHH5259_R3631
74.1
RHH5288_R3660
122.3
Effector memory CD8 T-cell nTPM: 86.6
Samples: 4
Max nTPM: 90.7
Min nTPM: 81.6
RHH5203_R3574
83.6
RHH5231_R3603
81.6
RHH5260_R3632
90.7
RHH5289_R3661
90.4
MAIT T-cell nTPM: 87.7
Samples: 4
Max nTPM: 93.3
Min nTPM: 82.7
RHH5233_R3605
84.5
RHH5205_R3576
93.3
RHH5262_R3634
82.7
RHH5297_R3663
90.1
Memory CD4 T-cell TFH nTPM: 100.3
Samples: 4
Max nTPM: 108.4
Min nTPM: 77.3
RHH5300_R3666
108.4
RHH5236_R3608
77.3
RHH5265_R3637
107.5
RHH5208_R3579
108.0
Memory CD4 T-cell Th1 nTPM: 92.4
Samples: 4
Max nTPM: 113.0
Min nTPM: 79.5
RHH5210_R3581
89.3
RHH5302_R3668
79.5
RHH5238_R3610
87.7
RHH5267_R3639
113.0
Memory CD4 T-cell Th1/Th17 nTPM: 89.5
Samples: 4
Max nTPM: 93.2
Min nTPM: 82.2
RHH5303_R3669
90.3
RHH5211_R3582
92.2
RHH5239_R3611
93.2
RHH5268_R3640
82.2
Memory CD4 T-cell Th17 nTPM: 106.7
Samples: 4
Max nTPM: 114.9
Min nTPM: 97.1
RHH5304_R3670
97.1
RHH5212_R3583
107.5
RHH5240_R3612
107.3
RHH5269_R3641
114.9
Memory CD4 T-cell Th2 nTPM: 107.4
Samples: 4
Max nTPM: 115.5
Min nTPM: 102.5
RHH5305_R3671
102.5
RHH5213_R3584
103.5
RHH5241_R3613
115.5
RHH5270_R3642
108.0
Naive CD4 T-cell nTPM: 107.1
Samples: 4
Max nTPM: 131.0
Min nTPM: 78.8
RHH5306_R3672
117.5
RHH5214_R3585
100.9
RHH5242_R3614
78.8
RHH5271_R3643
131.0
Naive CD8 T-cell nTPM: 103.7
Samples: 4
Max nTPM: 123.5
Min nTPM: 90.2
RHH5201_R3572
107.0
RHH5229_R3601
94.2
RHH5258_R3630
90.2
RHH5287_R3659
123.5
Non-Vd2 gdTCR nTPM: 103.4
Samples: 4
Max nTPM: 108.0
Min nTPM: 100.0
RHH5235_R3607
101.2
RHH5264_R3636
100.0
RHH5207_R3578
104.4
RHH5299_R3665
108.0
T-reg nTPM: 96.3
Samples: 4
Max nTPM: 113.9
Min nTPM: 82.4
RHH5301_R3667
84.9
RHH5237_R3609
113.9
RHH5266_R3638
103.9
RHH5209_R3580
82.4
Terminal effector memory CD4 T-cell nTPM: 90.7
Samples: 2
Max nTPM: 96.4
Min nTPM: 85.0
RHH5243_R3615
96.4
RHH5272_R3644
85.0
Terminal effector memory CD8 T-cell nTPM: 86.4
Samples: 4
Max nTPM: 94.9
Min nTPM: 62.5
RHH5232_R3604
93.9
RHH5204_R3575
62.5
RHH5261_R3633
94.3
RHH5296_R3662
94.9
Vd2 gdTCR nTPM: 97.5
Samples: 4
Max nTPM: 108.1
Min nTPM: 84.7
RHH5234_R3606
92.7
RHH5206_R3577
104.5
RHH5263_R3635
108.1
RHH5298_R3664
84.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
