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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
74.6
nTPM
Monaco:
238.9
nTPM
Schmiedel:
181.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
74.6
HPA sample
nTPM
gdT-cell nTPM: 34.4
Samples: 6
Max nTPM: 45.2
Min nTPM: 24.1
P10809_1007
29.6
P10809_1022
34.6
P10809_1041
37.1
P10809_1060
36.0
P10809_1077
24.1
P10809_1098
45.2
MAIT T-cell nTPM: 74.6
Samples: 6
Max nTPM: 96.2
Min nTPM: 42.8
P10809_1006
92.2
P10809_1024
96.2
P10809_1043
62.1
P10809_1062
70.2
P10809_1083
42.8
P10809_1097
84.2
Memory CD4 T-cell nTPM: 32.5
Samples: 6
Max nTPM: 46.5
Min nTPM: 20.8
P10809_1014
23.3
P10809_1026
40.9
P10809_1045
46.5
P10809_1064
20.8
P10809_1086
32.8
P10809_1113
30.4
Memory CD8 T-cell nTPM: 27.3
Samples: 5
Max nTPM: 33.9
Min nTPM: 16.2
P10809_1012
25.6
P10809_1027
33.9
P10809_1046
33.6
P10809_1065
16.2
P10809_1111
27.1
Naive CD4 T-cell nTPM: 39.7
Samples: 6
Max nTPM: 58.1
Min nTPM: 28.2
P10809_1015
28.2
P10809_1030
41.9
P10809_1049
42.2
P10809_1068
58.1
P10809_1085
36.9
P10809_1112
30.7
Naive CD8 T-cell nTPM: 20.9
Samples: 6
Max nTPM: 28.7
Min nTPM: 13.4
P10809_1016
13.4
P10809_1031
18.4
P10809_1050
17.2
P10809_1069
28.7
P10809_1087
22.8
P10809_1110
24.7
T-reg nTPM: 15.1
Samples: 6
Max nTPM: 17.9
Min nTPM: 12.5
P10809_1018
12.5
P10809_1037
17.3
P10809_1056
17.9
P10809_1075
16.8
P10809_1094
12.6
P10809_1106
13.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
238.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 96.9
Samples: 4
Max nTPM: 151.9
Min nTPM: 56.9
RHH5202_R3573
56.9
RHH5230_R3602
151.9
RHH5259_R3631
106.7
RHH5288_R3660
72.0
Effector memory CD8 T-cell nTPM: 58.6
Samples: 4
Max nTPM: 81.0
Min nTPM: 48.1
RHH5203_R3574
53.4
RHH5231_R3603
48.1
RHH5260_R3632
51.7
RHH5289_R3661
81.0
MAIT T-cell nTPM: 238.9
Samples: 4
Max nTPM: 251.1
Min nTPM: 221.7
RHH5233_R3605
238.4
RHH5205_R3576
251.1
RHH5262_R3634
244.3
RHH5297_R3663
221.7
Memory CD4 T-cell TFH nTPM: 69.6
Samples: 4
Max nTPM: 97.4
Min nTPM: 18.1
RHH5300_R3666
97.4
RHH5236_R3608
91.8
RHH5265_R3637
71.1
RHH5208_R3579
18.1
Memory CD4 T-cell Th1 nTPM: 79.6
Samples: 4
Max nTPM: 95.9
Min nTPM: 62.1
RHH5210_R3581
62.1
RHH5302_R3668
84.9
RHH5238_R3610
75.3
RHH5267_R3639
95.9
Memory CD4 T-cell Th1/Th17 nTPM: 185.3
Samples: 4
Max nTPM: 239.7
Min nTPM: 164.1
RHH5303_R3669
164.2
RHH5211_R3582
164.1
RHH5239_R3611
239.7
RHH5268_R3640
173.1
Memory CD4 T-cell Th17 nTPM: 174.7
Samples: 4
Max nTPM: 224.8
Min nTPM: 155.0
RHH5304_R3670
224.8
RHH5212_R3583
161.4
RHH5240_R3612
157.6
RHH5269_R3641
155.0
Memory CD4 T-cell Th2 nTPM: 44.3
Samples: 4
Max nTPM: 62.3
Min nTPM: 25.2
RHH5305_R3671
62.3
RHH5213_R3584
30.2
RHH5241_R3613
25.2
RHH5270_R3642
59.6
Naive CD4 T-cell nTPM: 92.9
Samples: 4
Max nTPM: 137.3
Min nTPM: 69.3
RHH5306_R3672
91.5
RHH5214_R3585
73.5
RHH5242_R3614
69.3
RHH5271_R3643
137.3
Naive CD8 T-cell nTPM: 49.9
Samples: 4
Max nTPM: 73.5
Min nTPM: 16.7
RHH5201_R3572
16.7
RHH5229_R3601
50.0
RHH5258_R3630
59.5
RHH5287_R3659
73.5
Non-Vd2 gdTCR nTPM: 57.7
Samples: 4
Max nTPM: 125.3
Min nTPM: 31.7
RHH5235_R3607
125.3
RHH5264_R3636
38.1
RHH5207_R3578
35.5
RHH5299_R3665
31.7
T-reg nTPM: 113.8
Samples: 4
Max nTPM: 172.1
Min nTPM: 67.0
RHH5301_R3667
106.3
RHH5237_R3609
67.0
RHH5266_R3638
172.1
RHH5209_R3580
109.6
Terminal effector memory CD4 T-cell nTPM: 46.4
Samples: 2
Max nTPM: 58.4
Min nTPM: 34.4
RHH5243_R3615
34.4
RHH5272_R3644
58.4
Terminal effector memory CD8 T-cell nTPM: 37.2
Samples: 4
Max nTPM: 60.2
Min nTPM: 19.9
RHH5232_R3604
36.3
RHH5204_R3575
19.9
RHH5261_R3633
60.2
RHH5296_R3662
32.3
Vd2 gdTCR nTPM: 151.9
Samples: 4
Max nTPM: 213.2
Min nTPM: 50.4
RHH5234_R3606
213.2
RHH5206_R3577
50.4
RHH5263_R3635
169.8
RHH5298_R3664
174.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
