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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
401.0
nTPM
Monaco:
297.8
nTPM
Schmiedel:
165.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
401.0
HPA sample
nTPM
gdT-cell nTPM: 102.4
Samples: 6
Max nTPM: 156.3
Min nTPM: 55.7
P10809_1007
55.7
P10809_1022
89.5
P10809_1041
156.3
P10809_1060
115.4
P10809_1077
83.8
P10809_1098
113.9
MAIT T-cell nTPM: 194.0
Samples: 6
Max nTPM: 296.2
Min nTPM: 79.4
P10809_1006
79.4
P10809_1024
296.2
P10809_1043
250.9
P10809_1062
225.1
P10809_1083
150.4
P10809_1097
161.9
Memory CD4 T-cell nTPM: 190.9
Samples: 6
Max nTPM: 287.3
Min nTPM: 131.4
P10809_1014
131.4
P10809_1026
179.0
P10809_1045
287.3
P10809_1064
160.4
P10809_1086
168.0
P10809_1113
219.3
Memory CD8 T-cell nTPM: 187.2
Samples: 5
Max nTPM: 245.6
Min nTPM: 136.5
P10809_1012
137.3
P10809_1027
238.9
P10809_1046
177.6
P10809_1065
136.5
P10809_1111
245.6
Naive CD4 T-cell nTPM: 76.8
Samples: 6
Max nTPM: 110.0
Min nTPM: 42.9
P10809_1015
42.9
P10809_1030
92.1
P10809_1049
110.0
P10809_1068
76.5
P10809_1085
78.9
P10809_1112
60.6
Naive CD8 T-cell nTPM: 78.4
Samples: 6
Max nTPM: 102.3
Min nTPM: 42.1
P10809_1016
42.1
P10809_1031
90.2
P10809_1050
83.8
P10809_1069
102.3
P10809_1087
75.0
P10809_1110
76.9
T-reg nTPM: 401.0
Samples: 6
Max nTPM: 559.1
Min nTPM: 220.0
P10809_1018
220.0
P10809_1037
430.0
P10809_1056
559.1
P10809_1075
432.8
P10809_1094
354.3
P10809_1106
409.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
297.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 297.9
Samples: 4
Max nTPM: 401.7
Min nTPM: 198.2
RHH5202_R3573
401.7
RHH5230_R3602
198.2
RHH5259_R3631
253.7
RHH5288_R3660
337.8
Effector memory CD8 T-cell nTPM: 248.4
Samples: 4
Max nTPM: 391.4
Min nTPM: 181.5
RHH5203_R3574
391.4
RHH5231_R3603
189.8
RHH5260_R3632
181.5
RHH5289_R3661
230.9
MAIT T-cell nTPM: 214.4
Samples: 4
Max nTPM: 232.6
Min nTPM: 190.3
RHH5233_R3605
207.5
RHH5205_R3576
232.6
RHH5262_R3634
190.3
RHH5297_R3663
227.1
Memory CD4 T-cell TFH nTPM: 242.6
Samples: 4
Max nTPM: 301.5
Min nTPM: 209.3
RHH5300_R3666
230.2
RHH5236_R3608
301.5
RHH5265_R3637
209.3
RHH5208_R3579
229.2
Memory CD4 T-cell Th1 nTPM: 195.3
Samples: 4
Max nTPM: 234.2
Min nTPM: 172.2
RHH5210_R3581
176.9
RHH5302_R3668
234.2
RHH5238_R3610
197.7
RHH5267_R3639
172.2
Memory CD4 T-cell Th1/Th17 nTPM: 247.3
Samples: 4
Max nTPM: 312.8
Min nTPM: 180.1
RHH5303_R3669
284.6
RHH5211_R3582
312.8
RHH5239_R3611
211.6
RHH5268_R3640
180.1
Memory CD4 T-cell Th17 nTPM: 271.6
Samples: 4
Max nTPM: 310.3
Min nTPM: 225.7
RHH5304_R3670
254.8
RHH5212_R3583
295.7
RHH5240_R3612
310.3
RHH5269_R3641
225.7
Memory CD4 T-cell Th2 nTPM: 173.8
Samples: 4
Max nTPM: 196.1
Min nTPM: 154.3
RHH5305_R3671
178.8
RHH5213_R3584
166.1
RHH5241_R3613
196.1
RHH5270_R3642
154.3
Naive CD4 T-cell nTPM: 77.6
Samples: 4
Max nTPM: 84.4
Min nTPM: 59.9
RHH5306_R3672
83.2
RHH5214_R3585
83.0
RHH5242_R3614
84.4
RHH5271_R3643
59.9
Naive CD8 T-cell nTPM: 89.2
Samples: 4
Max nTPM: 104.4
Min nTPM: 72.4
RHH5201_R3572
104.2
RHH5229_R3601
72.4
RHH5258_R3630
75.6
RHH5287_R3659
104.4
Non-Vd2 gdTCR nTPM: 119.7
Samples: 4
Max nTPM: 135.1
Min nTPM: 89.8
RHH5235_R3607
122.3
RHH5264_R3636
135.1
RHH5207_R3578
131.6
RHH5299_R3665
89.8
T-reg nTPM: 246.5
Samples: 4
Max nTPM: 306.5
Min nTPM: 212.0
RHH5301_R3667
253.0
RHH5237_R3609
306.5
RHH5266_R3638
212.0
RHH5209_R3580
214.5
Terminal effector memory CD4 T-cell nTPM: 116.0
Samples: 2
Max nTPM: 127.3
Min nTPM: 104.7
RHH5243_R3615
127.3
RHH5272_R3644
104.7
Terminal effector memory CD8 T-cell nTPM: 117.8
Samples: 4
Max nTPM: 127.9
Min nTPM: 103.2
RHH5232_R3604
115.3
RHH5204_R3575
124.8
RHH5261_R3633
103.2
RHH5296_R3662
127.9
Vd2 gdTCR nTPM: 169.5
Samples: 4
Max nTPM: 179.0
Min nTPM: 158.5
RHH5234_R3606
173.7
RHH5206_R3577
158.5
RHH5263_R3635
179.0
RHH5298_R3664
166.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
