HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:43.7 nTPM
HPA Brain:131.0 nTPM
GTEx:43.7 nTPM
FANTOM5:104.6 Scaled Tags Per Million
Pig:92.8 nTPM
Mouse:106.4 nTPM
Allen mouse:12.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054105
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 131.0
Sample id Sample description nTPM
Hippocampus
nTPM: 129.6
2621 Female, age 67, right hemisphere 185.0
2529 Female, age 94, left hemisphere 150.7
1911 Female, age 85, right hemisphere 126.0
2148 Female, age 91, left hemisphere 116.4
1898 Male, age 80, left hemisphere 101.8
1855 Male, age 76, left hemisphere 97.5
Dentate gyrus
nTPM: 108.4
2531 Female, age 67, both hemispheres 145.8
1927 Female, age 91, both hemispheres 117.5
2246 Female, age 85, both hemispheres 109.6
2530 Female, age 94, left hemisphere 108.4
2528 Male, age 74, both hemispheres 89.5
2010 Male, age 76, both hemispheres 79.5
Entorhinal gyrus
nTPM: 117.5
2613 Female, age 94, left hemisphere 178.2
2686 Male, age 75, right hemisphere 117.3
1938 Female, age 85, left hemisphere 114.1
2764 Male, age 80, right hemisphere 108.0
1787 Male, age 76, left hemisphere 105.6
2117 Female, age 91, right hemisphere 81.9
Hippocampus, CA1
nTPM: 124.8
2749 Male, age 80, left hemisphere 177.8
2527 Male, age 74, both hemispheres 158.4
2082 Female, age 91, right hemisphere 108.7
1873 Female, age 85, both hemispheres 99.3
2045 Male, age 76, both hemispheres 80.0
Hippocampus, CA2
nTPM: 111.0
2113 Female, age 91, right hemisphere 120.1
1963 Male, age 80, left hemisphere 120.0
2437 Female, age 94, left hemisphere 119.6
1940 Female, age 85, left hemisphere 108.1
2249 Male, age 74, both hemispheres 105.0
1892 Male, age 76, both hemispheres 93.3
Hippocampus, CA3
nTPM: 131.0
2137 Male, age 80, left hemisphere 195.0
2861 Female, age 67, both hemispheres 166.8
2620 Female, age 94, left hemisphere 132.4
2436 Male, age 74, both hemispheres 111.7
1867 Male, age 76, both hemispheres 92.2
1891 Female, age 85, both hemispheres 88.1
Parahippocampal cortex
nTPM: 122.4
2245 Female, age 91, both hemispheres 186.0
2622 Female, age 67, right hemisphere 142.2
2250 Female, age 67, right hemisphere 140.7
2692 Male, age 74, both hemispheres 115.8
2693 Female, age 94, both hemispheres 114.5
1933 Female, age 85, both hemispheres 110.5
2532 Female, age 72, left hemisphere 110.1
1990 Female, age 91, right hemisphere 106.8
1850 Male, age 80, both hemispheres 99.9
2018 Male, age 76, both hemispheres 96.9
Perirhinal gyrus
nTPM: 116.4
1847 Female, age 91, left hemisphere 138.1
2521 Female, age 94, right hemisphere 133.5
1794 Male, age 80, right hemisphere 111.1
1841 Female, age 85, right hemisphere 105.0
2848 Male, age 76, right hemisphere 94.1
Subiculum
nTPM: 104.3
2619 Male, age 74, both hemispheres 122.8
1901 Male, age 80, both hemispheres 117.9
2438 Female, age 94, left hemisphere 114.5
1977 Female, age 85, both hemispheres 100.1
2042 Male, age 76, both hemispheres 94.2
2729 Female, age 91, right hemisphere 76.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.7
Samples: 197

Max nTPM: 173.3
Min nTPM: 14.1
Std nTPM: 20.2
Median nTPM: 40.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 173.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 109.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 107.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 95.8
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 87.3
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 85.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 85.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 83.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 83.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 80.4
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 80.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 104.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 104.6
FF:10153-102I9 76 years, female 120.0
FF:10169-103B7 60 years, female 89.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 92.8
Pig sample Sample description nTPM
Subiculum
nTPM: 82.7
Samples: 4

Max nTPM: 103.6
Min nTPM: 73.2
Sample A Female 103.6
Sample B Female 75.5
Sample C Male 78.6
Sample D Male 73.2
Dorsal hippocampus
nTPM: 57.6
Samples: 4

Max nTPM: 63.7
Min nTPM: 45.0
Sample A Female 63.7
Sample B Female 62.0
Sample C Male 59.7
Sample D Male 45.0
Entorhinal cortex
nTPM: 92.8
Samples: 4

Max nTPM: 97.7
Min nTPM: 81.3
Sample A Female 97.7
Sample B Female 81.3
Sample C Male 97.2
Sample D Male 95.1
Ventral hippocampus
nTPM: 65.0
Samples: 4

Max nTPM: 81.7
Min nTPM: 50.2
Sample A Female 51.0
Sample B Female 50.2
Sample C Male 77.1
Sample D Male 81.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 106.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 106.4
Samples: 4

Max nTPM: 125.4
Min nTPM: 96.0
Sample A Male 105.0
Sample B Male 99.1
Sample C Female 96.0
Sample D Female 125.4
Hippocampal formation
nTPM: 93.8
Samples: 4

Max nTPM: 100.1
Min nTPM: 88.4
Sample A Male 88.4
Sample B Male 93.4
Sample C Female 100.1
Sample D Female 93.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.8
68499267 Antisense, RP_050118_01_C03, Mouse strain C57BL/6J (56 days, male) 12.8

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