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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
97.5
nTPM
Monaco:
407.3
nTPM
Schmiedel:
731.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
97.5
HPA sample
nTPM
gdT-cell nTPM: 12.2
Samples: 6
Max nTPM: 15.8
Min nTPM: 6.6
P10809_1007
8.5
P10809_1022
6.6
P10809_1041
15.0
P10809_1060
15.5
P10809_1077
11.8
P10809_1098
15.8
MAIT T-cell nTPM: 28.6
Samples: 6
Max nTPM: 36.3
Min nTPM: 21.0
P10809_1006
27.2
P10809_1024
21.0
P10809_1043
36.3
P10809_1062
25.6
P10809_1083
31.0
P10809_1097
30.5
Memory CD4 T-cell nTPM: 49.9
Samples: 6
Max nTPM: 70.7
Min nTPM: 29.8
P10809_1014
70.7
P10809_1026
57.0
P10809_1045
59.0
P10809_1064
29.8
P10809_1086
32.9
P10809_1113
49.9
Memory CD8 T-cell nTPM: 29.2
Samples: 5
Max nTPM: 48.3
Min nTPM: 12.3
P10809_1012
48.3
P10809_1027
22.3
P10809_1046
29.9
P10809_1065
12.3
P10809_1111
33.1
Naive CD4 T-cell nTPM: 97.5
Samples: 6
Max nTPM: 124.2
Min nTPM: 84.2
P10809_1015
124.2
P10809_1030
90.7
P10809_1049
104.7
P10809_1068
88.1
P10809_1085
84.2
P10809_1112
93.3
Naive CD8 T-cell nTPM: 61.9
Samples: 6
Max nTPM: 123.7
Min nTPM: 11.9
P10809_1016
123.7
P10809_1031
62.8
P10809_1050
68.5
P10809_1069
37.3
P10809_1087
11.9
P10809_1110
67.4
T-reg nTPM: 6.5
Samples: 6
Max nTPM: 9.6
Min nTPM: 2.2
P10809_1018
9.5
P10809_1037
7.6
P10809_1056
9.6
P10809_1075
5.7
P10809_1094
2.2
P10809_1106
4.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
407.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 243.4
Samples: 4
Max nTPM: 284.9
Min nTPM: 218.9
RHH5202_R3573
284.9
RHH5230_R3602
243.2
RHH5259_R3631
218.9
RHH5288_R3660
226.6
Effector memory CD8 T-cell nTPM: 57.7
Samples: 4
Max nTPM: 74.5
Min nTPM: 50.0
RHH5203_R3574
51.9
RHH5231_R3603
50.0
RHH5260_R3632
74.5
RHH5289_R3661
54.2
MAIT T-cell nTPM: 92.5
Samples: 4
Max nTPM: 109.9
Min nTPM: 78.8
RHH5233_R3605
96.1
RHH5205_R3576
85.0
RHH5262_R3634
109.9
RHH5297_R3663
78.8
Memory CD4 T-cell TFH nTPM: 310.7
Samples: 4
Max nTPM: 393.5
Min nTPM: 258.8
RHH5300_R3666
284.8
RHH5236_R3608
258.8
RHH5265_R3637
305.6
RHH5208_R3579
393.5
Memory CD4 T-cell Th1 nTPM: 273.4
Samples: 4
Max nTPM: 349.7
Min nTPM: 222.5
RHH5210_R3581
349.7
RHH5302_R3668
275.2
RHH5238_R3610
222.5
RHH5267_R3639
246.2
Memory CD4 T-cell Th1/Th17 nTPM: 179.2
Samples: 4
Max nTPM: 222.0
Min nTPM: 143.7
RHH5303_R3669
143.7
RHH5211_R3582
178.4
RHH5239_R3611
222.0
RHH5268_R3640
172.6
Memory CD4 T-cell Th17 nTPM: 191.0
Samples: 4
Max nTPM: 223.4
Min nTPM: 167.5
RHH5304_R3670
167.8
RHH5212_R3583
205.4
RHH5240_R3612
223.4
RHH5269_R3641
167.5
Memory CD4 T-cell Th2 nTPM: 247.1
Samples: 4
Max nTPM: 283.4
Min nTPM: 219.6
RHH5305_R3671
283.4
RHH5213_R3584
228.3
RHH5241_R3613
257.0
RHH5270_R3642
219.6
Naive CD4 T-cell nTPM: 407.3
Samples: 4
Max nTPM: 434.7
Min nTPM: 379.8
RHH5306_R3672
434.1
RHH5214_R3585
380.7
RHH5242_R3614
379.8
RHH5271_R3643
434.7
Naive CD8 T-cell nTPM: 384.6
Samples: 4
Max nTPM: 484.5
Min nTPM: 333.5
RHH5201_R3572
377.0
RHH5229_R3601
484.5
RHH5258_R3630
333.5
RHH5287_R3659
343.3
Non-Vd2 gdTCR nTPM: 80.4
Samples: 4
Max nTPM: 125.2
Min nTPM: 46.1
RHH5235_R3607
81.8
RHH5264_R3636
125.2
RHH5207_R3578
46.1
RHH5299_R3665
68.4
T-reg nTPM: 156.9
Samples: 4
Max nTPM: 185.8
Min nTPM: 139.5
RHH5301_R3667
156.3
RHH5237_R3609
139.5
RHH5266_R3638
185.8
RHH5209_R3580
145.8
Terminal effector memory CD4 T-cell nTPM: 68.8
Samples: 2
Max nTPM: 74.3
Min nTPM: 63.2
RHH5243_R3615
63.2
RHH5272_R3644
74.3
Terminal effector memory CD8 T-cell nTPM: 51.2
Samples: 4
Max nTPM: 66.9
Min nTPM: 31.3
RHH5232_R3604
46.6
RHH5204_R3575
31.3
RHH5261_R3633
66.9
RHH5296_R3662
60.0
Vd2 gdTCR nTPM: 83.9
Samples: 4
Max nTPM: 140.0
Min nTPM: 28.3
RHH5234_R3606
97.5
RHH5206_R3577
28.3
RHH5263_R3635
140.0
RHH5298_R3664
69.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
