HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:11.9 nTPM
HPA Brain:232.9 nTPM
GTEx:11.9 nTPM
FANTOM5:143.9 Scaled Tags Per Million
Pig:346.6 nTPM
Mouse:302.5 nTPM
Allen mouse:5.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005533Antibody CAB068196Antibody CAB068197
Glial cells Not detectedMediumMedium
Neuronal cells LowMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 232.9
Sample id Sample description nTPM
Hippocampus
nTPM: 52.6
1898 Male, age 80, left hemisphere 58.3
2621 Female, age 67, right hemisphere 57.1
2529 Female, age 94, left hemisphere 54.8
1855 Male, age 76, left hemisphere 53.2
1911 Female, age 85, right hemisphere 47.1
2148 Female, age 91, left hemisphere 45.4
Dentate gyrus
nTPM: 51.1
2246 Female, age 85, both hemispheres 65.6
2531 Female, age 67, both hemispheres 65.2
1927 Female, age 91, both hemispheres 55.8
2530 Female, age 94, left hemisphere 47.8
2010 Male, age 76, both hemispheres 41.8
2528 Male, age 74, both hemispheres 30.4
Entorhinal gyrus
nTPM: 112.2
2764 Male, age 80, right hemisphere 172.1
1787 Male, age 76, left hemisphere 170.6
1938 Female, age 85, left hemisphere 110.3
2686 Male, age 75, right hemisphere 98.6
2613 Female, age 94, left hemisphere 61.5
2117 Female, age 91, right hemisphere 60.0
Hippocampus, CA1
nTPM: 50.2
2045 Male, age 76, both hemispheres 90.0
2082 Female, age 91, right hemisphere 55.8
1873 Female, age 85, both hemispheres 39.1
2527 Male, age 74, both hemispheres 36.3
2749 Male, age 80, left hemisphere 29.9
Hippocampus, CA2
nTPM: 63.6
1940 Female, age 85, left hemisphere 102.8
2437 Female, age 94, left hemisphere 88.6
2113 Female, age 91, right hemisphere 67.7
1892 Male, age 76, both hemispheres 60.0
1963 Male, age 80, left hemisphere 34.5
2249 Male, age 74, both hemispheres 27.8
Hippocampus, CA3
nTPM: 48.1
2620 Female, age 94, left hemisphere 68.0
1867 Male, age 76, both hemispheres 60.8
2861 Female, age 67, both hemispheres 54.9
1891 Female, age 85, both hemispheres 43.8
2137 Male, age 80, left hemisphere 36.2
2436 Male, age 74, both hemispheres 24.7
Parahippocampal cortex
nTPM: 146.4
2532 Female, age 72, left hemisphere 219.8
1933 Female, age 85, both hemispheres 187.0
1850 Male, age 80, both hemispheres 184.9
2693 Female, age 94, both hemispheres 168.6
2245 Female, age 91, both hemispheres 154.1
2250 Female, age 67, right hemisphere 143.8
2622 Female, age 67, right hemisphere 133.6
2018 Male, age 76, both hemispheres 119.2
1990 Female, age 91, right hemisphere 109.9
2692 Male, age 74, both hemispheres 43.2
Perirhinal gyrus
nTPM: 232.9
1841 Female, age 85, right hemisphere 280.7
2848 Male, age 76, right hemisphere 270.0
1794 Male, age 80, right hemisphere 258.4
2521 Female, age 94, right hemisphere 201.0
1847 Female, age 91, left hemisphere 154.3
Subiculum
nTPM: 60.9
1977 Female, age 85, both hemispheres 103.9
2438 Female, age 94, left hemisphere 62.4
2619 Male, age 74, both hemispheres 61.7
2042 Male, age 76, both hemispheres 48.4
2729 Female, age 91, right hemisphere 47.4
1901 Male, age 80, both hemispheres 41.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.9
Samples: 197

Max nTPM: 75.9
Min nTPM: 2.7
Std nTPM: 12.5
Median nTPM: 7.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 75.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 71.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 66.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 62.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 61.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 52.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 52.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 52.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 51.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 47.1
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 36.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 143.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 143.9
FF:10153-102I9 76 years, female 162.3
FF:10169-103B7 60 years, female 125.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 346.6
Pig sample Sample description nTPM
Subiculum
nTPM: 178.3
Samples: 4

Max nTPM: 245.3
Min nTPM: 121.4
Sample A Female 245.3
Sample B Female 166.7
Sample C Male 121.4
Sample D Male 179.8
Dorsal hippocampus
nTPM: 44.8
Samples: 4

Max nTPM: 50.7
Min nTPM: 35.7
Sample A Female 35.7
Sample B Female 44.1
Sample C Male 50.7
Sample D Male 48.8
Entorhinal cortex
nTPM: 346.6
Samples: 4

Max nTPM: 393.2
Min nTPM: 302.7
Sample A Female 393.2
Sample B Female 302.7
Sample C Male 352.5
Sample D Male 338.1
Ventral hippocampus
nTPM: 39.7
Samples: 4

Max nTPM: 51.9
Min nTPM: 28.7
Sample A Female 34.6
Sample B Female 51.9
Sample C Male 43.7
Sample D Male 28.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 302.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 302.5
Samples: 4

Max nTPM: 385.8
Min nTPM: 180.5
Sample A Male 283.6
Sample B Male 360.0
Sample C Female 180.5
Sample D Female 385.8
Hippocampal formation
nTPM: 65.6
Samples: 4

Max nTPM: 100.4
Min nTPM: 50.0
Sample A Male 100.4
Sample B Male 56.6
Sample C Female 50.0
Sample D Female 55.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.9
79567505 Antisense, RP_071204_01_E10, Mouse strain C57BL/6J (56 days, male) 11.2
79677145 Antisense, RP_071204_01_E10, Mouse strain C57BL/6J (56 days, male) 10.9
668 Antisense, RP_Baylor_102903, Mouse strain C57BL/6J (56 days, male) 6.4
667 Antisense, RP_Baylor_102903, Mouse strain C57BL/6J (56 days, male) 4.5
669 Sense, RPS_Baylor_37013, Mouse strain C57BL/6J (56 days, male) 0.0

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