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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
98.7
nTPM
Monaco:
596.7
nTPM
Schmiedel:
679.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
98.7
HPA sample
nTPM
gdT-cell nTPM: 43.7
Samples: 6
Max nTPM: 70.2
Min nTPM: 31.3
P10809_1007
35.8
P10809_1022
31.3
P10809_1041
44.8
P10809_1060
33.7
P10809_1077
46.5
P10809_1098
70.2
MAIT T-cell nTPM: 55.4
Samples: 6
Max nTPM: 68.8
Min nTPM: 46.4
P10809_1006
68.8
P10809_1024
46.4
P10809_1043
62.1
P10809_1062
49.1
P10809_1083
48.7
P10809_1097
57.2
Memory CD4 T-cell nTPM: 77.1
Samples: 6
Max nTPM: 125.6
Min nTPM: 58.9
P10809_1014
85.7
P10809_1026
58.9
P10809_1045
60.6
P10809_1064
62.7
P10809_1086
68.8
P10809_1113
125.6
Memory CD8 T-cell nTPM: 52.6
Samples: 5
Max nTPM: 80.2
Min nTPM: 35.0
P10809_1012
62.0
P10809_1027
35.0
P10809_1046
36.8
P10809_1065
49.1
P10809_1111
80.2
Naive CD4 T-cell nTPM: 98.7
Samples: 6
Max nTPM: 149.4
Min nTPM: 63.3
P10809_1015
134.8
P10809_1030
70.8
P10809_1049
63.3
P10809_1068
65.7
P10809_1085
107.9
P10809_1112
149.4
Naive CD8 T-cell nTPM: 82.6
Samples: 6
Max nTPM: 110.1
Min nTPM: 59.7
P10809_1016
98.2
P10809_1031
69.5
P10809_1050
60.8
P10809_1069
59.7
P10809_1087
97.2
P10809_1110
110.1
T-reg nTPM: 73.9
Samples: 6
Max nTPM: 96.1
Min nTPM: 48.1
P10809_1018
84.2
P10809_1037
48.1
P10809_1056
73.3
P10809_1075
61.8
P10809_1094
79.9
P10809_1106
96.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
596.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 447.2
Samples: 4
Max nTPM: 502.5
Min nTPM: 405.9
RHH5202_R3573
502.5
RHH5230_R3602
405.9
RHH5259_R3631
443.0
RHH5288_R3660
437.5
Effector memory CD8 T-cell nTPM: 404.9
Samples: 4
Max nTPM: 536.1
Min nTPM: 342.0
RHH5203_R3574
536.1
RHH5231_R3603
342.0
RHH5260_R3632
390.1
RHH5289_R3661
351.2
MAIT T-cell nTPM: 409.6
Samples: 4
Max nTPM: 510.6
Min nTPM: 351.3
RHH5233_R3605
384.1
RHH5205_R3576
510.6
RHH5262_R3634
351.3
RHH5297_R3663
392.3
Memory CD4 T-cell TFH nTPM: 433.5
Samples: 4
Max nTPM: 483.2
Min nTPM: 330.6
RHH5300_R3666
460.4
RHH5236_R3608
330.6
RHH5265_R3637
483.2
RHH5208_R3579
459.9
Memory CD4 T-cell Th1 nTPM: 465.4
Samples: 4
Max nTPM: 600.7
Min nTPM: 347.6
RHH5210_R3581
600.7
RHH5302_R3668
429.0
RHH5238_R3610
347.6
RHH5267_R3639
484.3
Memory CD4 T-cell Th1/Th17 nTPM: 410.0
Samples: 4
Max nTPM: 436.9
Min nTPM: 380.9
RHH5303_R3669
380.9
RHH5211_R3582
420.2
RHH5239_R3611
402.1
RHH5268_R3640
436.9
Memory CD4 T-cell Th17 nTPM: 506.4
Samples: 4
Max nTPM: 560.3
Min nTPM: 456.0
RHH5304_R3670
456.0
RHH5212_R3583
464.4
RHH5240_R3612
560.3
RHH5269_R3641
545.0
Memory CD4 T-cell Th2 nTPM: 496.0
Samples: 4
Max nTPM: 544.9
Min nTPM: 440.5
RHH5305_R3671
490.8
RHH5213_R3584
544.9
RHH5241_R3613
440.5
RHH5270_R3642
507.7
Naive CD4 T-cell nTPM: 596.8
Samples: 4
Max nTPM: 699.1
Min nTPM: 529.8
RHH5306_R3672
608.5
RHH5214_R3585
549.7
RHH5242_R3614
529.8
RHH5271_R3643
699.1
Naive CD8 T-cell nTPM: 560.2
Samples: 4
Max nTPM: 601.4
Min nTPM: 509.2
RHH5201_R3572
572.7
RHH5229_R3601
509.2
RHH5258_R3630
557.6
RHH5287_R3659
601.4
Non-Vd2 gdTCR nTPM: 384.8
Samples: 4
Max nTPM: 443.7
Min nTPM: 344.3
RHH5235_R3607
369.9
RHH5264_R3636
344.3
RHH5207_R3578
443.7
RHH5299_R3665
381.3
T-reg nTPM: 502.4
Samples: 4
Max nTPM: 581.5
Min nTPM: 387.0
RHH5301_R3667
475.0
RHH5237_R3609
387.0
RHH5266_R3638
566.1
RHH5209_R3580
581.5
Terminal effector memory CD4 T-cell nTPM: 418.1
Samples: 2
Max nTPM: 430.1
Min nTPM: 406.0
RHH5243_R3615
430.1
RHH5272_R3644
406.0
Terminal effector memory CD8 T-cell nTPM: 382.2
Samples: 4
Max nTPM: 433.0
Min nTPM: 336.7
RHH5232_R3604
379.4
RHH5204_R3575
433.0
RHH5261_R3633
379.6
RHH5296_R3662
336.7
Vd2 gdTCR nTPM: 383.6
Samples: 4
Max nTPM: 476.4
Min nTPM: 304.0
RHH5234_R3606
378.2
RHH5206_R3577
476.4
RHH5263_R3635
375.8
RHH5298_R3664
304.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
