HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:8.6 nTPM
HPA Brain:22.1 nTPM
GTEx:8.6 nTPM
FANTOM5:17.5 Scaled Tags Per Million
Pig:7.3 nTPM
Mouse:26.8 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058815
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.1
Sample id Sample description nTPM
Hippocampus
nTPM: 13.2
1898 Male, age 80, left hemisphere 23.8
2148 Female, age 91, left hemisphere 15.8
2621 Female, age 67, right hemisphere 12.0
1911 Female, age 85, right hemisphere 9.8
1855 Male, age 76, left hemisphere 8.9
2529 Female, age 94, left hemisphere 8.9
Dentate gyrus
nTPM: 12.7
1927 Female, age 91, both hemispheres 17.3
2010 Male, age 76, both hemispheres 13.7
2530 Female, age 94, left hemisphere 12.6
2246 Female, age 85, both hemispheres 12.5
2531 Female, age 67, both hemispheres 11.8
2528 Male, age 74, both hemispheres 8.4
Entorhinal gyrus
nTPM: 17.1
2764 Male, age 80, right hemisphere 22.4
1938 Female, age 85, left hemisphere 21.8
1787 Male, age 76, left hemisphere 19.1
2613 Female, age 94, left hemisphere 17.0
2117 Female, age 91, right hemisphere 11.3
2686 Male, age 75, right hemisphere 11.2
Hippocampus, CA1
nTPM: 20.5
2749 Male, age 80, left hemisphere 57.9
1873 Female, age 85, both hemispheres 13.6
2527 Male, age 74, both hemispheres 11.5
2045 Male, age 76, both hemispheres 10.1
2082 Female, age 91, right hemisphere 9.5
Hippocampus, CA2
nTPM: 16.8
1963 Male, age 80, left hemisphere 28.1
1892 Male, age 76, both hemispheres 21.9
1940 Female, age 85, left hemisphere 15.4
2437 Female, age 94, left hemisphere 14.7
2113 Female, age 91, right hemisphere 11.8
2249 Male, age 74, both hemispheres 9.1
Hippocampus, CA3
nTPM: 16.7
2137 Male, age 80, left hemisphere 31.5
1867 Male, age 76, both hemispheres 21.8
1891 Female, age 85, both hemispheres 13.0
2620 Female, age 94, left hemisphere 12.0
2436 Male, age 74, both hemispheres 11.0
2861 Female, age 67, both hemispheres 11.0
Parahippocampal cortex
nTPM: 16.8
1850 Male, age 80, both hemispheres 24.1
1933 Female, age 85, both hemispheres 19.1
2245 Female, age 91, both hemispheres 19.1
2532 Female, age 72, left hemisphere 18.2
1990 Female, age 91, right hemisphere 18.1
2693 Female, age 94, both hemispheres 16.1
2250 Female, age 67, right hemisphere 15.4
2622 Female, age 67, right hemisphere 14.8
2018 Male, age 76, both hemispheres 13.6
2692 Male, age 74, both hemispheres 9.2
Perirhinal gyrus
nTPM: 22.1
1847 Female, age 91, left hemisphere 28.1
1794 Male, age 80, right hemisphere 24.1
2521 Female, age 94, right hemisphere 22.3
1841 Female, age 85, right hemisphere 19.0
2848 Male, age 76, right hemisphere 16.8
Subiculum
nTPM: 13.6
1901 Male, age 80, both hemispheres 20.6
1977 Female, age 85, both hemispheres 19.1
2438 Female, age 94, left hemisphere 13.2
2042 Male, age 76, both hemispheres 10.6
2619 Male, age 74, both hemispheres 10.0
2729 Female, age 91, right hemisphere 8.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.6
Samples: 197

Max nTPM: 27.9
Min nTPM: 2.2
Std nTPM: 5.3
Median nTPM: 6.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 27.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 26.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 24.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 23.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 22.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 22.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 22.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 22.2
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 21.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 19.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 19.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.5
FF:10153-102I9 76 years, female 22.5
FF:10169-103B7 60 years, female 12.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.3
Pig sample Sample description nTPM
Subiculum
nTPM: 7.0
Samples: 4

Max nTPM: 7.8
Min nTPM: 6.4
Sample A Female 7.8
Sample B Female 6.8
Sample C Male 7.0
Sample D Male 6.4
Dorsal hippocampus
nTPM: 6.0
Samples: 4

Max nTPM: 7.1
Min nTPM: 4.4
Sample A Female 7.1
Sample B Female 6.4
Sample C Male 5.9
Sample D Male 4.4
Entorhinal cortex
nTPM: 7.0
Samples: 4

Max nTPM: 7.2
Min nTPM: 6.7
Sample A Female 7.1
Sample B Female 7.2
Sample C Male 6.9
Sample D Male 6.7
Ventral hippocampus
nTPM: 7.3
Samples: 4

Max nTPM: 9.1
Min nTPM: 6.2
Sample A Female 7.4
Sample B Female 6.5
Sample C Male 9.1
Sample D Male 6.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.8
Samples: 4

Max nTPM: 32.8
Min nTPM: 23.7
Sample A Male 25.2
Sample B Male 25.5
Sample C Female 23.7
Sample D Female 32.8
Hippocampal formation
nTPM: 25.4
Samples: 4

Max nTPM: 26.0
Min nTPM: 23.9
Sample A Male 23.9
Sample B Male 25.9
Sample C Female 25.8
Sample D Female 26.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
70430796 Antisense, RP_050614_02_A10, Mouse strain C57BL/6J (56 days, male) 4.3
74988454 Antisense, RP_060315_05_D09, Mouse strain C57BL/6J (56 days, male) 1.6

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