HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:24.6 nTPM
HPA Brain:39.2 nTPM
GTEx:24.6 nTPM
FANTOM5:74.2 Scaled Tags Per Million
Pig:16.9 nTPM
Mouse:21.7 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036548
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.2
Sample id Sample description nTPM
Hippocampus
nTPM: 38.2
2621 Female, age 67, right hemisphere 40.0
2529 Female, age 94, left hemisphere 39.6
2148 Female, age 91, left hemisphere 39.4
1911 Female, age 85, right hemisphere 37.7
1898 Male, age 80, left hemisphere 37.3
1855 Male, age 76, left hemisphere 35.5
Dentate gyrus
nTPM: 35.7
2530 Female, age 94, left hemisphere 40.0
2528 Male, age 74, both hemispheres 36.8
2246 Female, age 85, both hemispheres 36.5
1927 Female, age 91, both hemispheres 35.6
2531 Female, age 67, both hemispheres 35.1
2010 Male, age 76, both hemispheres 30.1
Entorhinal gyrus
nTPM: 39.2
2117 Female, age 91, right hemisphere 45.7
1787 Male, age 76, left hemisphere 39.5
2764 Male, age 80, right hemisphere 39.2
1938 Female, age 85, left hemisphere 38.8
2686 Male, age 75, right hemisphere 37.1
2613 Female, age 94, left hemisphere 35.2
Hippocampus, CA1
nTPM: 32.7
2082 Female, age 91, right hemisphere 35.9
2527 Male, age 74, both hemispheres 35.2
1873 Female, age 85, both hemispheres 32.3
2749 Male, age 80, left hemisphere 30.6
2045 Male, age 76, both hemispheres 29.6
Hippocampus, CA2
nTPM: 35.9
1963 Male, age 80, left hemisphere 37.5
2113 Female, age 91, right hemisphere 37.2
2437 Female, age 94, left hemisphere 36.7
2249 Male, age 74, both hemispheres 36.0
1940 Female, age 85, left hemisphere 34.6
1892 Male, age 76, both hemispheres 33.4
Hippocampus, CA3
nTPM: 36.4
2436 Male, age 74, both hemispheres 43.4
2620 Female, age 94, left hemisphere 36.8
2137 Male, age 80, left hemisphere 35.6
2861 Female, age 67, both hemispheres 35.3
1867 Male, age 76, both hemispheres 34.3
1891 Female, age 85, both hemispheres 33.3
Parahippocampal cortex
nTPM: 36.1
2622 Female, age 67, right hemisphere 42.7
2245 Female, age 91, both hemispheres 37.8
2250 Female, age 67, right hemisphere 37.7
2532 Female, age 72, left hemisphere 36.9
2693 Female, age 94, both hemispheres 35.8
1990 Female, age 91, right hemisphere 35.1
2692 Male, age 74, both hemispheres 34.9
1933 Female, age 85, both hemispheres 34.8
2018 Male, age 76, both hemispheres 33.1
1850 Male, age 80, both hemispheres 32.2
Perirhinal gyrus
nTPM: 35.3
1794 Male, age 80, right hemisphere 37.9
2848 Male, age 76, right hemisphere 35.8
1841 Female, age 85, right hemisphere 35.1
1847 Female, age 91, left hemisphere 34.7
2521 Female, age 94, right hemisphere 32.8
Subiculum
nTPM: 37.6
2619 Male, age 74, both hemispheres 41.8
2438 Female, age 94, left hemisphere 39.3
2729 Female, age 91, right hemisphere 38.3
2042 Male, age 76, both hemispheres 36.5
1977 Female, age 85, both hemispheres 36.1
1901 Male, age 80, both hemispheres 33.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.6
Samples: 197

Max nTPM: 39.1
Min nTPM: 13.3
Std nTPM: 3.6
Median nTPM: 24.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 39.1
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 34.5
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 34.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 31.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 31.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 31.1
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 31.1
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 30.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 30.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 30.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 29.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.2
FF:10169-103B7 60 years, female 84.1
FF:10153-102I9 76 years, female 64.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.9
Pig sample Sample description nTPM
Subiculum
nTPM: 17.0
Samples: 4

Max nTPM: 21.7
Min nTPM: 13.4
Sample A Female 21.7
Sample B Female 16.2
Sample C Male 16.5
Sample D Male 13.4
Dorsal hippocampus
nTPM: 15.9
Samples: 4

Max nTPM: 18.0
Min nTPM: 14.0
Sample A Female 17.1
Sample B Female 18.0
Sample C Male 14.5
Sample D Male 14.0
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 19.6
Min nTPM: 15.2
Sample A Female 16.1
Sample B Female 15.4
Sample C Male 19.6
Sample D Male 15.2
Ventral hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 20.7
Min nTPM: 13.0
Sample A Female 14.7
Sample B Female 13.0
Sample C Male 20.7
Sample D Male 17.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.6
Samples: 4

Max nTPM: 22.8
Min nTPM: 19.8
Sample A Male 21.9
Sample B Male 21.9
Sample C Female 22.8
Sample D Female 19.8
Hippocampal formation
nTPM: 21.8
Samples: 4

Max nTPM: 24.3
Min nTPM: 20.2
Sample A Male 21.4
Sample B Male 20.2
Sample C Female 21.1
Sample D Female 24.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
74359443 Antisense, RP_051219_04_F08, Mouse strain C57BL/6J (56 days, male) 0.3

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