HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:18.9 nTPM
HPA Brain:30.7 nTPM
GTEx:18.9 nTPM
FANTOM5:14.0 Scaled Tags Per Million
Pig:12.8 nTPM
Mouse:30.6 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030140
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.7
Sample id Sample description nTPM
Hippocampus
nTPM: 19.2
2529 Female, age 94, left hemisphere 21.7
1898 Male, age 80, left hemisphere 20.6
1911 Female, age 85, right hemisphere 19.9
1855 Male, age 76, left hemisphere 19.7
2621 Female, age 67, right hemisphere 17.7
2148 Female, age 91, left hemisphere 15.9
Dentate gyrus
nTPM: 19.9
2246 Female, age 85, both hemispheres 26.5
2531 Female, age 67, both hemispheres 19.7
2010 Male, age 76, both hemispheres 19.5
1927 Female, age 91, both hemispheres 19.1
2528 Male, age 74, both hemispheres 17.6
2530 Female, age 94, left hemisphere 16.9
Entorhinal gyrus
nTPM: 27.6
2613 Female, age 94, left hemisphere 32.8
1938 Female, age 85, left hemisphere 32.3
1787 Male, age 76, left hemisphere 29.6
2764 Male, age 80, right hemisphere 26.4
2117 Female, age 91, right hemisphere 22.7
2686 Male, age 75, right hemisphere 21.9
Hippocampus, CA1
nTPM: 21.4
2082 Female, age 91, right hemisphere 24.2
2749 Male, age 80, left hemisphere 21.4
2045 Male, age 76, both hemispheres 21.3
2527 Male, age 74, both hemispheres 21.1
1873 Female, age 85, both hemispheres 18.8
Hippocampus, CA2
nTPM: 21.3
1940 Female, age 85, left hemisphere 27.8
1892 Male, age 76, both hemispheres 23.6
2113 Female, age 91, right hemisphere 22.4
2249 Male, age 74, both hemispheres 21.1
2437 Female, age 94, left hemisphere 18.0
1963 Male, age 80, left hemisphere 14.8
Hippocampus, CA3
nTPM: 20.6
1867 Male, age 76, both hemispheres 25.0
1891 Female, age 85, both hemispheres 24.5
2436 Male, age 74, both hemispheres 23.1
2137 Male, age 80, left hemisphere 19.7
2861 Female, age 67, both hemispheres 17.2
2620 Female, age 94, left hemisphere 14.3
Parahippocampal cortex
nTPM: 27.2
1850 Male, age 80, both hemispheres 33.7
1933 Female, age 85, both hemispheres 31.4
1990 Female, age 91, right hemisphere 28.1
2018 Male, age 76, both hemispheres 27.9
2532 Female, age 72, left hemisphere 27.2
2250 Female, age 67, right hemisphere 26.8
2692 Male, age 74, both hemispheres 26.3
2693 Female, age 94, both hemispheres 26.0
2245 Female, age 91, both hemispheres 24.0
2622 Female, age 67, right hemisphere 20.5
Perirhinal gyrus
nTPM: 30.7
2848 Male, age 76, right hemisphere 32.8
1847 Female, age 91, left hemisphere 32.3
1841 Female, age 85, right hemisphere 31.7
1794 Male, age 80, right hemisphere 28.8
2521 Female, age 94, right hemisphere 27.6
Subiculum
nTPM: 23.9
2438 Female, age 94, left hemisphere 27.8
1901 Male, age 80, both hemispheres 26.6
1977 Female, age 85, both hemispheres 25.4
2042 Male, age 76, both hemispheres 23.9
2619 Male, age 74, both hemispheres 21.6
2729 Female, age 91, right hemisphere 18.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.9
Samples: 197

Max nTPM: 65.6
Min nTPM: 11.4
Std nTPM: 5.2
Median nTPM: 18.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 65.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 31.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 29.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 29.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 29.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 28.8
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 28.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 27.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 26.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 26.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 26.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.0
FF:10169-103B7 60 years, female 16.6
FF:10153-102I9 76 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.8
Pig sample Sample description nTPM
Subiculum
nTPM: 9.8
Samples: 4

Max nTPM: 11.0
Min nTPM: 7.0
Sample A Female 10.1
Sample B Female 10.9
Sample C Male 7.0
Sample D Male 11.0
Dorsal hippocampus
nTPM: 12.9
Samples: 4

Max nTPM: 16.3
Min nTPM: 9.7
Sample A Female 16.3
Sample B Female 11.3
Sample C Male 14.1
Sample D Male 9.7
Entorhinal cortex
nTPM: 8.4
Samples: 4

Max nTPM: 9.7
Min nTPM: 7.5
Sample A Female 8.3
Sample B Female 9.7
Sample C Male 8.1
Sample D Male 7.5
Ventral hippocampus
nTPM: 11.5
Samples: 4

Max nTPM: 14.7
Min nTPM: 9.6
Sample A Female 14.7
Sample B Female 10.3
Sample C Male 9.6
Sample D Male 11.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.6
Samples: 4

Max nTPM: 31.0
Min nTPM: 21.5
Sample A Male 24.3
Sample B Male 29.4
Sample C Female 31.0
Sample D Female 21.5
Hippocampal formation
nTPM: 30.6
Samples: 4

Max nTPM: 33.0
Min nTPM: 28.7
Sample A Male 33.0
Sample B Male 28.7
Sample C Female 29.7
Sample D Female 30.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70609244 Antisense, RP_050414_01_E03, Mouse strain C57BL/6J (56 days, male) 0.1

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