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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
122.4
nTPM
Monaco:
117.2
nTPM
Schmiedel:
36.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
122.4
HPA sample
nTPM
gdT-cell nTPM: 87.2
Samples: 6
Max nTPM: 110.7
Min nTPM: 67.8
P10809_1007
67.8
P10809_1022
67.9
P10809_1041
89.8
P10809_1060
91.4
P10809_1077
110.7
P10809_1098
95.5
MAIT T-cell nTPM: 79.0
Samples: 6
Max nTPM: 103.6
Min nTPM: 49.4
P10809_1006
49.4
P10809_1024
93.1
P10809_1043
55.9
P10809_1062
80.4
P10809_1083
103.6
P10809_1097
91.3
Memory CD4 T-cell nTPM: 85.9
Samples: 6
Max nTPM: 120.7
Min nTPM: 56.5
P10809_1014
56.5
P10809_1026
80.9
P10809_1045
76.0
P10809_1064
99.1
P10809_1086
120.7
P10809_1113
82.0
Memory CD8 T-cell nTPM: 104.7
Samples: 5
Max nTPM: 129.3
Min nTPM: 67.4
P10809_1012
67.4
P10809_1027
124.2
P10809_1046
86.8
P10809_1065
115.6
P10809_1111
129.3
Naive CD4 T-cell nTPM: 67.2
Samples: 6
Max nTPM: 76.8
Min nTPM: 52.7
P10809_1015
52.7
P10809_1030
76.8
P10809_1049
75.9
P10809_1068
65.3
P10809_1085
70.3
P10809_1112
62.4
Naive CD8 T-cell nTPM: 85.2
Samples: 6
Max nTPM: 137.8
Min nTPM: 50.1
P10809_1016
50.1
P10809_1031
72.0
P10809_1050
76.1
P10809_1069
102.2
P10809_1087
137.8
P10809_1110
72.7
T-reg nTPM: 122.4
Samples: 6
Max nTPM: 170.8
Min nTPM: 83.1
P10809_1018
83.1
P10809_1037
146.4
P10809_1056
94.0
P10809_1075
170.8
P10809_1094
107.2
P10809_1106
132.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
117.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 86.9
Samples: 4
Max nTPM: 114.6
Min nTPM: 66.4
RHH5202_R3573
66.4
RHH5230_R3602
69.9
RHH5259_R3631
114.6
RHH5288_R3660
96.7
Effector memory CD8 T-cell nTPM: 109.6
Samples: 4
Max nTPM: 148.5
Min nTPM: 90.4
RHH5203_R3574
90.4
RHH5231_R3603
148.5
RHH5260_R3632
101.1
RHH5289_R3661
98.4
MAIT T-cell nTPM: 62.9
Samples: 4
Max nTPM: 73.0
Min nTPM: 53.3
RHH5233_R3605
73.0
RHH5205_R3576
57.7
RHH5262_R3634
67.5
RHH5297_R3663
53.3
Memory CD4 T-cell TFH nTPM: 75.0
Samples: 4
Max nTPM: 87.4
Min nTPM: 49.1
RHH5300_R3666
49.1
RHH5236_R3608
87.4
RHH5265_R3637
83.9
RHH5208_R3579
79.7
Memory CD4 T-cell Th1 nTPM: 81.7
Samples: 4
Max nTPM: 92.0
Min nTPM: 73.7
RHH5210_R3581
73.7
RHH5302_R3668
86.4
RHH5238_R3610
92.0
RHH5267_R3639
74.7
Memory CD4 T-cell Th1/Th17 nTPM: 79.0
Samples: 4
Max nTPM: 99.5
Min nTPM: 67.5
RHH5303_R3669
76.4
RHH5211_R3582
72.7
RHH5239_R3611
99.5
RHH5268_R3640
67.5
Memory CD4 T-cell Th17 nTPM: 64.5
Samples: 4
Max nTPM: 81.5
Min nTPM: 48.1
RHH5304_R3670
81.5
RHH5212_R3583
65.0
RHH5240_R3612
63.4
RHH5269_R3641
48.1
Memory CD4 T-cell Th2 nTPM: 69.5
Samples: 4
Max nTPM: 86.8
Min nTPM: 54.1
RHH5305_R3671
75.8
RHH5213_R3584
61.4
RHH5241_R3613
86.8
RHH5270_R3642
54.1
Naive CD4 T-cell nTPM: 78.0
Samples: 4
Max nTPM: 102.8
Min nTPM: 54.9
RHH5306_R3672
64.8
RHH5214_R3585
54.9
RHH5242_R3614
102.8
RHH5271_R3643
89.4
Naive CD8 T-cell nTPM: 86.0
Samples: 4
Max nTPM: 105.7
Min nTPM: 58.7
RHH5201_R3572
79.3
RHH5229_R3601
100.4
RHH5258_R3630
58.7
RHH5287_R3659
105.7
Non-Vd2 gdTCR nTPM: 117.3
Samples: 4
Max nTPM: 145.2
Min nTPM: 88.5
RHH5235_R3607
104.7
RHH5264_R3636
145.2
RHH5207_R3578
130.6
RHH5299_R3665
88.5
T-reg nTPM: 72.5
Samples: 4
Max nTPM: 77.8
Min nTPM: 67.5
RHH5301_R3667
67.8
RHH5237_R3609
76.9
RHH5266_R3638
77.8
RHH5209_R3580
67.5
Terminal effector memory CD4 T-cell nTPM: 106.7
Samples: 2
Max nTPM: 111.5
Min nTPM: 101.9
RHH5243_R3615
111.5
RHH5272_R3644
101.9
Terminal effector memory CD8 T-cell nTPM: 97.6
Samples: 4
Max nTPM: 110.4
Min nTPM: 82.0
RHH5232_R3604
101.3
RHH5204_R3575
110.4
RHH5261_R3633
82.0
RHH5296_R3662
96.8
Vd2 gdTCR nTPM: 89.5
Samples: 4
Max nTPM: 113.1
Min nTPM: 62.5
RHH5234_R3606
88.9
RHH5206_R3577
113.1
RHH5263_R3635
93.4
RHH5298_R3664
62.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
