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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
207.7
nTPM
Monaco:
379.9
nTPM
Schmiedel:
278.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
207.7
HPA sample
nTPM
gdT-cell nTPM: 178.5
Samples: 6
Max nTPM: 242.8
Min nTPM: 121.1
P10809_1007
121.1
P10809_1022
242.8
P10809_1041
224.8
P10809_1060
157.6
P10809_1077
169.5
P10809_1098
155.0
MAIT T-cell nTPM: 207.7
Samples: 6
Max nTPM: 289.2
Min nTPM: 171.4
P10809_1006
171.4
P10809_1024
289.2
P10809_1043
198.1
P10809_1062
195.1
P10809_1083
189.0
P10809_1097
203.5
Memory CD4 T-cell nTPM: 126.4
Samples: 6
Max nTPM: 145.5
Min nTPM: 109.3
P10809_1014
116.2
P10809_1026
109.3
P10809_1045
145.5
P10809_1064
125.4
P10809_1086
139.4
P10809_1113
122.7
Memory CD8 T-cell nTPM: 167.6
Samples: 5
Max nTPM: 198.5
Min nTPM: 149.2
P10809_1012
149.2
P10809_1027
165.0
P10809_1046
198.5
P10809_1065
165.4
P10809_1111
159.9
Naive CD4 T-cell nTPM: 112.7
Samples: 6
Max nTPM: 121.8
Min nTPM: 99.5
P10809_1015
99.5
P10809_1030
113.6
P10809_1049
121.8
P10809_1068
117.5
P10809_1085
120.9
P10809_1112
103.1
Naive CD8 T-cell nTPM: 157.2
Samples: 6
Max nTPM: 186.5
Min nTPM: 119.1
P10809_1016
119.1
P10809_1031
154.5
P10809_1050
173.5
P10809_1069
186.5
P10809_1087
177.6
P10809_1110
132.1
T-reg nTPM: 172.1
Samples: 6
Max nTPM: 210.1
Min nTPM: 151.8
P10809_1018
154.5
P10809_1037
210.1
P10809_1056
157.9
P10809_1075
151.8
P10809_1094
191.9
P10809_1106
166.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
379.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 257.8
Samples: 4
Max nTPM: 299.2
Min nTPM: 228.0
RHH5202_R3573
259.3
RHH5230_R3602
228.0
RHH5259_R3631
299.2
RHH5288_R3660
244.5
Effector memory CD8 T-cell nTPM: 329.4
Samples: 4
Max nTPM: 368.4
Min nTPM: 296.2
RHH5203_R3574
368.4
RHH5231_R3603
302.6
RHH5260_R3632
296.2
RHH5289_R3661
350.3
MAIT T-cell nTPM: 355.0
Samples: 4
Max nTPM: 521.2
Min nTPM: 266.0
RHH5233_R3605
320.7
RHH5205_R3576
521.2
RHH5262_R3634
312.2
RHH5297_R3663
266.0
Memory CD4 T-cell TFH nTPM: 210.6
Samples: 4
Max nTPM: 301.9
Min nTPM: 158.2
RHH5300_R3666
158.2
RHH5236_R3608
180.9
RHH5265_R3637
201.3
RHH5208_R3579
301.9
Memory CD4 T-cell Th1 nTPM: 197.4
Samples: 4
Max nTPM: 232.1
Min nTPM: 157.2
RHH5210_R3581
232.1
RHH5302_R3668
157.2
RHH5238_R3610
182.9
RHH5267_R3639
217.3
Memory CD4 T-cell Th1/Th17 nTPM: 233.5
Samples: 4
Max nTPM: 285.9
Min nTPM: 179.5
RHH5303_R3669
186.6
RHH5211_R3582
282.0
RHH5239_R3611
285.9
RHH5268_R3640
179.5
Memory CD4 T-cell Th17 nTPM: 255.4
Samples: 4
Max nTPM: 303.3
Min nTPM: 207.7
RHH5304_R3670
207.7
RHH5212_R3583
254.7
RHH5240_R3612
303.3
RHH5269_R3641
256.0
Memory CD4 T-cell Th2 nTPM: 220.7
Samples: 4
Max nTPM: 301.8
Min nTPM: 159.7
RHH5305_R3671
159.7
RHH5213_R3584
301.8
RHH5241_R3613
205.6
RHH5270_R3642
215.7
Naive CD4 T-cell nTPM: 167.6
Samples: 4
Max nTPM: 186.5
Min nTPM: 141.3
RHH5306_R3672
141.3
RHH5214_R3585
186.5
RHH5242_R3614
176.8
RHH5271_R3643
165.7
Naive CD8 T-cell nTPM: 262.9
Samples: 4
Max nTPM: 295.1
Min nTPM: 234.3
RHH5201_R3572
295.1
RHH5229_R3601
281.2
RHH5258_R3630
234.3
RHH5287_R3659
241.1
Non-Vd2 gdTCR nTPM: 379.9
Samples: 4
Max nTPM: 461.8
Min nTPM: 300.7
RHH5235_R3607
461.8
RHH5264_R3636
344.4
RHH5207_R3578
412.8
RHH5299_R3665
300.7
T-reg nTPM: 210.7
Samples: 4
Max nTPM: 246.2
Min nTPM: 154.0
RHH5301_R3667
154.0
RHH5237_R3609
233.8
RHH5266_R3638
208.6
RHH5209_R3580
246.2
Terminal effector memory CD4 T-cell nTPM: 288.4
Samples: 2
Max nTPM: 348.1
Min nTPM: 228.7
RHH5243_R3615
348.1
RHH5272_R3644
228.7
Terminal effector memory CD8 T-cell nTPM: 337.7
Samples: 4
Max nTPM: 378.1
Min nTPM: 281.8
RHH5232_R3604
358.2
RHH5204_R3575
332.7
RHH5261_R3633
378.1
RHH5296_R3662
281.8
Vd2 gdTCR nTPM: 328.0
Samples: 4
Max nTPM: 440.7
Min nTPM: 243.4
RHH5234_R3606
243.4
RHH5206_R3577
440.7
RHH5263_R3635
380.6
RHH5298_R3664
247.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.