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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
88.9
nTPM
HPA Brain:
140.6
nTPM
GTEx:
88.9
nTPM
FANTOM5:
384.8
Scaled Tags Per Million
Pig:
203.9
nTPM
Mouse:
208.4
nTPM
Allen mouse:
9.8
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
140.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 109.9
1830
Male, age 51, unknown
146.4
2411
Female, age 72, unknown
143.3
2019
Male, age 18, unknown
141.5
1870
Female, age 42, unknown
134.8
1833
Male, age 53, unknown
133.2
2828
Female, age 72, unknown
95.6
1827
Male, age 72, unknown
87.6
2219
Male, age 76, both hemispheres
80.6
2666
Male, age 74, left hemisphere
77.0
2586
Male, age 75, left hemisphere
59.2
Dorsal raphe nucleus nTPM: 97.5
2750
Male, age 76, both hemispheres
129.3
2016
Female, age 72, unknown
100.0
1828
Male, age 53, unknown
98.2
2047
Male, age 72, unknown
80.0
2298
Female, age 72, unknown
79.8
Inferior colliculus nTPM: 86.8
1848
Female, age 42, unknown
93.1
2097
Female, age 72, unknown
89.6
1890
Male, age 53, unknown
86.8
2849
Male, age 72, unknown
77.8
Median raphe nucleus nTPM: 95.4
2220
Male, age 76, midline
95.4
Periaquaductal grey, anterior nTPM: 81.6
1947
Male, age 18, unknown
93.3
2502
Female, age 75, unknown
90.1
1795
Male, age 51, unknown
61.3
Periaquaductal grey, dorsal nTPM: 78.1
2464
Female, age 72, unknown
90.2
2850
Male, age 76, both hemispheres
88.8
1831
Male, age 72, unknown
79.2
1840
Male, age 53, unknown
54.0
Periaquaductal grey, lateral nTPM: 84.9
2272
Male, age 74, both hemispheres
96.8
2053
Male, age 18, unknown
80.4
2140
Male, age 76, both hemispheres
77.5
Pretectal area nTPM: 88.5
1815
Male, age 53, unknown
111.9
2273
Male, age 74, both hemispheres
106.7
1817
Female, age 42, unknown
102.2
2007
Male, age 72, unknown
95.3
2316
Male, age 76, right hemisphere
89.2
2224
Female, age 72, unknown
85.4
2667
Female, age 75, unknown
84.2
2407
Male, age 75, both hemispheres
79.2
2825
Male, age 18, unknown
78.0
1944
Female, age 72, unknown
75.0
1816
Male, age 51, unknown
66.3
Red nucleus nTPM: 140.6
1821
Female, age 72, unknown
182.1
1865
Male, age 51, unknown
175.0
1904
Male, age 53, unknown
173.6
1954
Female, age 42, unknown
162.2
2823
Male, age 76, right hemisphere
148.1
2785
Male, age 18, unknown
145.3
2227
Male, age 72, unknown
140.6
2769
Male, age 72, unknown
137.7
2503
Female, age 72, unknown
127.6
2725
Female, age 75, unknown
108.5
2588
Male, age 74, left hemisphere
95.7
2584
Male, age 75, left hemisphere
91.2
Substantia nigra nTPM: 98.3
1851
Male, age 51, unknown
108.9
1889
Female, age 72, unknown
106.0
2409
Female, age 72, unknown
105.0
2241
Male, age 72, unknown
103.5
2590
Female, age 75, unknown
102.3
2583
Male, age 75, right hemisphere
100.2
1941
Male, age 53, unknown
99.1
2699
Male, age 18, unknown
98.0
1916
Female, age 42, unknown
86.9
2665
Male, age 74, both hemispheres
73.6
Superior colliculus nTPM: 95.5
1913
Female, age 42, unknown
131.1
2587
Male, age 74, left hemisphere
125.1
1995
Male, age 72, unknown
120.4
1895
Male, age 76, right hemisphere
110.7
2668
Female, age 75, unknown
103.0
1839
Male, age 51, unknown
93.1
2087
Female, age 72, unknown
76.9
1796
Male, age 53, unknown
72.5
2261
Male, age 18, unknown
65.1
2664
Male, age 75, both hemispheres
56.8
Ventral tegmental area nTPM: 111.9
2223
Female, age 72, unknown
144.8
2410
Female, age 72, unknown
137.0
2218
Male, age 76, both hemispheres
109.5
1942
Male, age 51, unknown
94.7
1915
Female, age 42, unknown
92.8
2021
Male, age 53, unknown
92.5
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
88.9
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 88.9
Samples: 139
Max nTPM: 214.3
Min nTPM: 37.1
Std nTPM: 33.1
Median nTPM: 78.5
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
214.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
190.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
186.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
183.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
182.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
178.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
157.2
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
156.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
150.9
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
149.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
144.4
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
135.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
134.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
133.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
133.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
132.4
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
131.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
129.1
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
128.9
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
122.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
122.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
119.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
116.4
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
116.0
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
114.9
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
112.3
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
111.5
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
111.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
110.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
109.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
108.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
108.5
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
106.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
105.6
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
102.8
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
102.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
101.3
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
101.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
101.1
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
100.4
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
100.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
100.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
100.0
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
99.8
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
96.9
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
95.1
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
94.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
93.8
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
90.3
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
89.6
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
87.9
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
87.5
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
87.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
85.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
84.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
84.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
84.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
83.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
83.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
83.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
82.5
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
81.9
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
81.7
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
81.4
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
81.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
80.4
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
79.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
79.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
78.8
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
78.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
77.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
77.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
77.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
76.6
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
76.3
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
75.6
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
75.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
75.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
74.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
74.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
74.5
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
74.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
73.8
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
73.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
73.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
73.3
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
72.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
72.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
72.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
71.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
71.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
71.1
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
70.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
70.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
70.4
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
70.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
69.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
69.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
69.1
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
68.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
68.2
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
67.6
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
67.2
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
67.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
66.8
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
65.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
65.8
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
65.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
65.7
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
65.5
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
64.3
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
63.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
63.8
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
63.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
63.4
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
62.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
62.6
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
62.6
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
62.6
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
61.6
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
61.5
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
60.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
59.0
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
58.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
57.7
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
57.5
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
57.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
56.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
55.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
53.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
51.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
50.6
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
49.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
47.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
46.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
46.0
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
45.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
44.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
37.1
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
208.4
Mouse sample
Sample description
nTPM
Midbrain nTPM: 208.4
Samples: 4
Max nTPM: 215.4
Min nTPM: 199.4
Sample A
Male
199.4
Sample B
Male
215.4
Sample C
Female
210.0
Sample D
Female
208.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.